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  5. SPAC890.04c.1

SPAC890.04c.1


Description : ribosome biogenesis protein Ytm1 (predicted) [Source:PomBase;Acc:SPAC890.04c]


Gene families : OG_03_0001531 (OF) Phylogenetic Tree(s): OG0001531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC890.04c.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AFR98556 No alias ribosome biogenesis protein YTM1;NLE (NUC135) domain;WD... 0.05 OF
AOA66814 No alias NLE (NUC135) domain 0.07 OF
CAL00687 No alias WD domain, G-beta repeat 0.05 OF
CBF77455 No alias Ribosome biogenesis protein ytm1 0.07 OF
EAL90024 No alias microtubule associated protein (Ytm1), putative 0.11 OF
EDO00222 No alias NLE 0.05 OF
EGR52559 No alias WD40 repeat 0.07 OF
EJF58274 No alias WD domain, G-beta repeat 0.03 OF
ESA42456 No alias WD40 repeat 0.05 OF
ESA42457 No alias WD40 repeat 0.04 OF
ESU12968 No alias NLE 0.06 OF
KHC83699 No alias ribosome biogenesis protein YTM1;NLE (NUC135) domain;"WD... 0.03 OF
MGG_02460T0 No alias Ribosome biogenesis protein YTM1... 0.03 OF
POW06914 No alias NLE;WD40 repeat 0.02 OF
YOR272W No alias Constituent of 66S pre-ribosomal particles; forms a... 0.08 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012972 NLE 11 73
IPR001680 WD40_repeat 348 384
IPR001680 WD40_repeat 191 225
IPR001680 WD40_repeat 261 297
No external refs found!