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  5. SPAC22F3.08c.1

SPAC22F3.08c.1


Description : ATP-dependent RNA helicase Rok1 (predicted) [Source:PomBase;Acc:SPAC22F3.08c]


Gene families : OG_03_0003256 (OF) Phylogenetic Tree(s): OG0003256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC22F3.08c.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AFR96432 No alias ATP-dependent RNA helicase ROK1;Helicase conserved... 0.14 OF
AOA68519 No alias DEAD/DEAH box helicase domain 0.07 OF
CAG83439 No alias DEAD/DEAH box helicase domain 0.15 OF
CAK37267 No alias Helicase conserved C-terminal domain 0.27 OF
CBF88477 No alias ATP-dependent RNA helicase rok1 0.14 OF
EAA35509 No alias DEAD/DEAH box helicase domain 0.14 OF
EAL90957 No alias ATP dependent RNA helicase (Rok1), putative 0.2 OF
EAU92987 No alias ROK1 0.07 OF
EDN96134 No alias DEAD/DEAH box helicase domain 0.14 OF
EGR47194 No alias DEAD/DEAH box helicase domain 0.22 OF
EJF58459 No alias Helicase conserved C-terminal domain 0.04 OF
ESU06119 No alias ATP-dependent RNA helicase ROK1 0.12 OF
MGG_04523T0 No alias ATP-dependent RNA helicase ROK1... 0.18 OF
YGL171W No alias RNA-dependent ATPase; involved in pre-rRNA processing at... 0.24 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 274 383
IPR011545 DEAD/DEAH_box_helicase_dom 70 238
No external refs found!