SPAC19G12.06c.1

Description : histone H2A beta [Source:PomBase;Acc:SPAC19G12.06c]

Gene families : OG_03_0000659 (OF) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPAC19G12.06c.1
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AFR93053	No alias	histone H2A, variant;C-terminus of histone H2A;Core...	0.09	OF
AGV15363	No alias	histone H2A, variant;C-terminus of histone H2A;Core...	0.09	OF
AOA67110	No alias	Histone H2A/H2B/H3	0.09	OF
CAG80027	No alias	Histone H2A, C-terminal domain	0.1	OF
CAK40928	No alias	histone H2A httA-Aspergillus niger	0.07	OF
CBF82646	No alias	Histone H2A	0.07	OF
EAA30206	No alias	Histone H2A/H2B/H3	0.09	OF
EAL93027	No alias	histone H2A	0.1	OF
EAU89257	No alias	histone H2A	0.03	OF
EAU89414	No alias	histone H2A	0.04	OF
EDN95084	No alias	Histone H2A, C-terminal domain	0.11	OF
EED84538	No alias	Histone H2A/H2B/H3	0.03	OF
EGR48861	No alias	Histone H2A, C-terminal domain	0.08	OF
EJF60523	No alias	Core histone H2A/H2B/H3/H4	0.06	OF
EJF60532	No alias	C-terminus of histone H2A	0.06	OF
ESU16497	No alias	Histone H2A, C-terminal domain	0.07	OF
KHC78940	No alias	histone H2A.1;C-terminus of histone H2A;Core histone...	0.09	OF
KHC83194	No alias	histone H2A.2;Core histone H2A/H2B/H3/H4;C-terminus of...	0.11	OF
POV98629	No alias	Histone H2A, C-terminal domain;Histone H2A/H2B/H3	0.06	OF
POW16261	No alias	Histone H2A/H2B/H3;Histone H2A, C-terminal domain	0.07	OF
YBL003C	No alias	Histone H2A; core histone protein required for chromatin...	0.09	OF
YDR225W	No alias	Histone H2A; core histone protein required for chromatin...	0.12	OF

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	93	126
IPR007125	Histone_H2A/H2B/H3	15	90

External Links

No external refs found!