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  5. SPAC17H9.02.1

SPAC17H9.02.1


Description : TRAMP complex ATP-dependent RNA helicase (predicted) [Source:PomBase;Acc:SPAC17H9.02]


Gene families : OG_03_0002438 (OF) Phylogenetic Tree(s): OG0002438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC17H9.02.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
CAG80921 No alias ATP-dependent RNA helicase Ski2, C-terminal 0.02 OF
CAK47920 No alias DSHCT (NUC185) domain 0.02 OF
CBF77580 No alias ATP dependent RNA helicase 0.05 OF
EAA27062 No alias ATP-dependent RNA helicase Ski2, C-terminal 0.03 OF
EAL90072 No alias ATP dependent RNA helicase (Dob1), putative 0.05 OF
EDO01477 No alias DEAD/DEAH box helicase domain 0.04 OF
EGR48006 No alias Helicase, C-terminal 0.04 OF
ESU06996 No alias ATP-dependent RNA helicase DOB1 0.04 OF
KHC72012 No alias ATP-dependent RNA helicase DOB1;rRNA-processing arch... 0.08 OF
MGG_03931T0 No alias FRQ-interacting RNA helicase [Source:UniProtKB/TrEMBL;Acc:G4NH56] 0.07 OF
POW02478 No alias ATP-dependent RNA helicase Ski2, C-terminal;DEAD/DEAH... 0.03 OF
YJL050W No alias ATP-dependent 3'-5' RNA helicase of the DExD/H family;... 0.04 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025696 rRNA_proc-arch_dom 566 827
IPR011545 DEAD/DEAH_box_helicase_dom 128 275
IPR001650 Helicase_C 358 512
IPR012961 Ski2_C 855 1025
No external refs found!