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  5. SPAC1565.08.1

SPAC1565.08.1


Description : AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48 [Source:PomBase;Acc:SPAC1565.08]


Gene families : OG_03_0000176 (OF) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC1565.08.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AFR97364 No alias transitional endoplasmic reticulum ATPase;Vps4 C... 0.04 OF
AOA69460 No alias ATPase, AAA-type, core 0.03 OF
CAK39004 No alias Vps4 C terminal oligomerisation domain 0.04 OF
EDN94326 No alias ATPase, AAA-type, core 0.01 OF
EDO00716 No alias AAA ATPase, AAA+ lid domain 0.01 OF
EGR46048 No alias CDC48, N-terminal subdomain 0.02 OF
ESA43229 No alias CDC48, domain 2 0.02 OF
ESA43230 No alias CDC48, domain 2 0.02 OF
ESU11502 No alias cell division cycle protein 48 0.04 OF
ESU17882 No alias AAA ATPase, AAA+ lid domain 0.02 OF
KHC83823 No alias cell division control protein 48;AAA+ lid domain;"Cell... 0.05 OF
YDL126C No alias AAA ATPase; subunit of polyUb-selective segregase... 0.09 OF

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 688 730
IPR041569 AAA_lid_3 413 453
IPR003338 CDC4_N-term_subdom 46 126
IPR003959 ATPase_AAA_core 261 389
IPR003959 ATPase_AAA_core 534 666
IPR004201 Cdc48_dom2 147 208
No external refs found!