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  5. SPAC13G6.01c.1

SPAC13G6.01c.1


Description : ubiquitin-protein ligase E3 Rad8 [Source:PomBase;Acc:SPAC13G6.01c]


Gene families : OG_03_0003227 (OF) Phylogenetic Tree(s): OG0003227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC13G6.01c.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AFR92433 No alias DNA repair protein RAD5;HIRAN domain;Helicase conserved... 0.02 OF
AOA68805 No alias Zinc finger, RING-type 0.03 OF
CAK40162 No alias HIRAN domain 0.02 OF
CBF90313 No alias DNA repair protein rad5 0.08 OF
EAA29275 No alias SNF2-related, N-terminal domain 0.05 OF
EGR50103 No alias SNF2-related, N-terminal domain 0.04 OF
ESU08197 No alias DNA repair protein RAD5 0.02 OF
POW04855 No alias Zinc finger, C3HC4 type (RING finger);SNF2-related,... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 448 822
IPR014905 HIRAN 206 316
IPR001650 Helicase_C 974 1078
No external refs found!