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  5. CAG79717

CAG79717


Description : La-type HTH domain


Gene families : OG_03_0001546 (OF) Phylogenetic Tree(s): OG0001546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAG79717
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AFR95526 No alias lupus La protein;La domain 0.17 OF
AOA66939 No alias RNA recognition motif domain 0.19 OF
CAK45498 No alias La domain 0.17 OF
CBF88265 No alias RNA-binding La domain protein 0.1 OF
EAA33272 No alias RNA recognition motif domain 0.17 OF
EAL90591 No alias RNA-binding La domain protein 0.22 OF
EAU87944 No alias La protein, RNA-binding domainLa-type HTH domainRNA... 0.03 OF
EED82858 No alias La-type HTH domain 0.04 OF
EGR47878 No alias RNA recognition motif domain 0.1 OF
EJF61383 No alias La domain 0.11 OF
ESU07343 No alias RNA recognition motif domain 0.03 OF
KHC83505 No alias lupus La protein;La domain 0.11 OF
POW10843 No alias La-type HTH domain 0.06 OF
SPAC57A10.10c.1 No alias La protein homolog [Source:PomBase;Acc:SPAC57A10.10c] 0.09 OF
YDL051W No alias RNA binding protein required for maturation of tRNA and... 0.12 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 270 328
IPR006630 La_HTH 136 197
No external refs found!