YDR496C


Description : Pumilio-homology domain protein; binds the 3' UTR of ASH1 mRNA and represses its translation, resulting in proper asymmetric localization of ASH1 mRNA; required at post-transcriptional step for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; co-sediments with the 60S ribosomal subunit and is required for its biogenesis [Source:SGD;Acc:S000002904]


Gene families : OG_03_0003138 (OF) Phylogenetic Tree(s): OG0003138_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YDR496C
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR93180 No alias pumilio domain-containing protein;CPL (NUC119) domain 0.31 OF
AOA69988 No alias CPL domain 0.3 OF
CAG78341 No alias CPL domain 0.39 OF
CBF87883 No alias conserved hypothetical protein 0.35 OF
EAA34590 No alias CPL domain 0.38 OF
EAL90372 No alias conserved hypothetical protein 0.4 OF
EAU87141 No alias puf family RNA-binding protein 0.16 OF
EED82548 No alias CPL domain 0.05 OF
EGR46711 No alias CPL domain 0.36 OF
EJF56997 No alias CPL (NUC119) domain 0.14 OF
ESU06410 No alias CPL domain 0.36 OF
KHC81563 No alias pumilio homology domain family member 6;CPL (NUC119) domain 0.15 OF
MGG_13803T0 No alias Putative uncharacterized protein... 0.32 OF
SPCP1E11.11.1 No alias pumilio family RNA-binding protein Puf6 (predicted)... 0.27 OF

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012959 CPL_dom 426 570
No external refs found!