Description : Pumilio-homology domain protein; binds the 3' UTR of ASH1 mRNA and represses its translation, resulting in proper asymmetric localization of ASH1 mRNA; required at post-transcriptional step for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; co-sediments with the 60S ribosomal subunit and is required for its biogenesis [Source:SGD;Acc:S000002904]
Gene families : OG_03_0003138 (OF) Phylogenetic Tree(s): OG0003138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: YDR496C | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AFR93180 | No alias | pumilio domain-containing protein;CPL (NUC119) domain | 0.31 | OF | |
AOA69988 | No alias | CPL domain | 0.3 | OF | |
CAG78341 | No alias | CPL domain | 0.39 | OF | |
CBF87883 | No alias | conserved hypothetical protein | 0.35 | OF | |
EAA34590 | No alias | CPL domain | 0.38 | OF | |
EAL90372 | No alias | conserved hypothetical protein | 0.4 | OF | |
EAU87141 | No alias | puf family RNA-binding protein | 0.16 | OF | |
EED82548 | No alias | CPL domain | 0.05 | OF | |
EGR46711 | No alias | CPL domain | 0.36 | OF | |
EJF56997 | No alias | CPL (NUC119) domain | 0.14 | OF | |
ESU06410 | No alias | CPL domain | 0.36 | OF | |
KHC81563 | No alias | pumilio homology domain family member 6;CPL (NUC119) domain | 0.15 | OF | |
MGG_13803T0 | No alias | Putative uncharacterized protein... | 0.32 | OF | |
SPCP1E11.11.1 | No alias | pumilio family RNA-binding protein Puf6 (predicted)... | 0.27 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012959 | CPL_dom | 426 | 570 |
No external refs found! |