EAA27062

Description : ATP-dependent RNA helicase Ski2, C-terminal

Gene families : OG_03_0002438 (OF) Phylogenetic Tree(s): OG0002438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EAA27062
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AFR94744	No alias	ATP-dependent RNA helicase DOB1;rRNA-processing arch...	0.12	OF
AOA68690	No alias	rRNA-processing arch domain	0.07	OF
CAG80921	No alias	ATP-dependent RNA helicase Ski2, C-terminal	0.23	OF
CAK47920	No alias	DSHCT (NUC185) domain	0.16	OF
CBF77580	No alias	ATP dependent RNA helicase	0.15	OF
EAL90072	No alias	ATP dependent RNA helicase (Dob1), putative	0.2	OF
EAU86800	No alias	MTR4	0.07	OF
EDO01477	No alias	DEAD/DEAH box helicase domain	0.25	OF
EGR48006	No alias	Helicase, C-terminal	0.15	OF
ESU06996	No alias	ATP-dependent RNA helicase DOB1	0.18	OF
KHC72012	No alias	ATP-dependent RNA helicase DOB1;rRNA-processing arch...	0.19	OF
MGG_03931T0	No alias	FRQ-interacting RNA helicase [Source:UniProtKB/TrEMBL;Acc:G4NH56]	0.08	OF
POW02478	No alias	ATP-dependent RNA helicase Ski2, C-terminal;DEAD/DEAH...	0.07	OF
SPAC17H9.02.1	No alias	TRAMP complex ATP-dependent RNA helicase (predicted)...	0.03	OF
SPAC6F12.16c.1	No alias	ATP-dependent RNA helicase, TRAMP complex subunit Mtr4...	0.16	OF
YJL050W	No alias	ATP-dependent 3'-5' RNA helicase of the DExD/H family;...	0.23	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	183	329
IPR025696	rRNA_proc-arch_dom	636	903
IPR001650	Helicase_C	504	582
IPR012961	Ski2_C	931	1101

External Links

No external refs found!