Heatmap: Cluster_7 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
FB cap+lamellae,YMG,strain #326
FB stipe,YMG,strain #326
Hyphal knots,control,strain #326
Mycelium
Mycelium,Co-culture B.subtilis,28C,8h
Mycelium,Co-culture E.coli,28C,8h
Mycelium,LiCl,strain #326
Mycelium,Predation A.avenae,20h,matA/matB KO
Mycelium,Predation A.avenae,2h,matA/matB KO
Mycelium,Predation A.avenae,8h,matA/matB KO
Mycelium,control,20C,matA/matB KO
Mycelium,control,28C,8h
Mycelium,control,strain #326
Stg 1 primordium,YMG,strain #326
Stg 2 primordium,YMG,strain #326
Mycelium,Co-culture B.subtilis,YMG,strain #130
Mycelium,Co-culture E.coli,YMG,strain #130
Mycelium,Dark 37C 96h,YMG,matA43/matB43 KO
Mycelium,Dark 37h 120h,YMG,strain #130
Mycelium,Mechanical damage,YMG,strain #130
Mycelium,Predation A.avenae,YMG,strain #130
Mycelium,Predation C.elegans,YMG,strain #130
Vegetative mycelium,YMG,strain #326
Mycelium,control,YMG,37C,strain #130
YFB cap,YMG,strain #326
YFB lamellae,YMG,strain #326
secondary hyphal knots,YMG,strain #326
strain #130
- - - 0.15 - - - - - - - - - - 2.09 - - 4.13 - - - - 2.36 - - - - -
- - - - - - - - - 4.81 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 4.81 - - - - - - - - - -
-10.49 -9.4 -2.69 -5.33 -4.79 -6.78 -4.65 2.47 0.41 4.13 -4.39 -6.59 -11.15 -6.99 -6.93 -2.96 -5.51 -6.05 -1.33 -2.31 0.52 -2.62 -2.38 -0.47 -12.26 -10.87 -6.44 -6.39
-6.59 -3.56 -0.31 -1.09 -3.93 -4.78 2.06 0.53 -2.53 2.48 -4.75 -7.34 0.53 -1.4 -1.49 -0.5 -0.61 1.69 0.96 -1.04 -0.36 -1.54 -2.95 -0.69 -4.67 0.31 1.11 -0.74
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.26 - - - - - - - - - - - - - - - - - - - - - - - 4.54
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.1 - 1.38 - - - - - - - - - - 4.07 - - - - - - - - - -
-1.88 -1.46 -2.28 -1.54 -2.62 -2.54 0.77 -1.07 0.41 -0.18 -0.59 -2.67 1.2 0.51 -1.76 - - 2.63 -1.5 - - -1.28 -1.09 -2.29 0.83 2.32 1.51 -
-8.59 -1.54 -0.02 0.79 -6.87 -9.74 -2.92 1.6 1.57 -0.24 0.26 -5.92 -2.04 0.25 -0.0 1.3 -0.89 -0.69 0.54 0.82 1.09 0.98 -2.09 0.74 -1.91 -3.83 -0.16 -2.19
-1.18 -4.05 -0.61 1.88 -2.91 - -3.63 1.66 2.52 1.29 3.14 - - -3.58 -3.71 - - - - -2.45 -1.84 -2.6 -3.4 - - - -2.55 0.77
-3.4 -1.44 -0.02 0.39 0.51 0.59 0.47 -0.5 -0.54 0.54 -0.12 0.49 0.51 0.34 -0.06 -0.65 -0.08 0.85 -0.21 -0.33 -0.01 0.07 -0.11 -0.19 -1.73 -0.83 0.19 0.27
-2.28 -1.16 0.4 -0.03 0.43 0.36 0.63 -0.0 0.25 0.67 0.14 0.41 0.5 0.17 0.03 -1.06 -0.46 1.03 0.02 -0.6 -0.57 -0.64 -0.33 -0.66 -1.83 -0.39 0.2 0.32
-2.89 -0.59 -1.48 0.27 1.22 0.19 -0.62 0.52 0.37 1.57 0.63 1.44 -0.23 -2.05 -2.13 -1.31 -0.57 -0.63 -0.03 -0.87 -1.14 -1.82 -0.39 -0.15 -2.48 0.8 -1.62 1.23
-6.09 -2.56 -0.1 -0.0 -1.02 -3.05 0.12 -1.67 -0.27 -1.29 0.43 -0.2 0.45 1.22 0.62 0.15 0.56 1.46 0.36 -0.47 -0.81 -0.04 0.14 -0.07 -1.2 -1.99 1.18 0.38
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 1.3 - - - 3.07 - - - - - - - 3.4 - - - - - - - - - 2.71 - -
-3.13 -3.26 -0.27 3.24 -0.87 -1.01 0.46 -0.18 0.08 -0.03 -0.93 -0.44 0.14 -0.96 -1.85 -0.15 -0.71 -0.76 -0.66 -0.73 -0.19 0.18 -1.21 0.07 -1.08 -0.44 -1.5 -0.71
-3.95 -1.5 -0.7 1.16 0.51 0.98 1.28 -0.92 -0.21 -0.34 -1.04 0.45 1.63 -0.01 -0.56 -1.14 -0.55 -0.35 -0.8 -0.65 -0.59 -0.38 -0.53 -0.82 -1.29 -0.22 0.25 0.85
- - -2.77 4.74 -2.94 - - - -1.5 - - -3.17 - -3.63 - - - - - - - - - - -3.22 -2.4 -2.81 -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.25 - - - - - 4.54 - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- -0.06 - 1.29 - 1.15 - 1.19 - 4.21 - - - - - - - - - - - - 0.61 - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-1.94 -0.62 0.3 0.64 -0.11 0.52 -0.47 1.39 -0.54 0.5 0.29 -1.26 -0.21 -1.17 -1.02 1.67 -0.22 0.48 -0.62 0.8 0.3 0.69 -1.62 0.1 -2.61 -3.13 -1.24 -1.9
-7.94 -5.56 2.59 0.44 -5.45 -5.73 2.21 -2.16 -2.49 -3.94 -1.21 -5.21 -2.74 -0.78 0.03 -1.5 -2.86 1.28 0.7 -1.23 0.6 -0.36 2.26 -0.18 -4.71 -4.85 -3.37 -2.81
-7.18 -5.09 -0.65 -1.98 -7.6 - -2.16 2.29 1.83 3.54 -3.55 -8.0 -6.21 -5.53 -3.54 -2.91 -5.19 -5.25 0.72 -1.53 0.85 -1.86 0.61 -0.54 -7.46 -7.35 -3.52 -5.43
- - -1.9 2.45 -0.16 -0.19 -2.19 0.95 1.1 -0.12 1.25 1.16 0.77 -0.84 -1.37 - -1.03 -0.87 - - - -0.9 - - 0.94 1.49 0.06 -0.55
- - - 0.74 0.49 - - - 1.01 1.53 1.01 0.94 - -1.24 0.24 - - 1.78 - 0.88 - - - - - 1.46 - 2.69
- - - 3.49 - - - - - 2.15 - - - - 1.24 - - - - - - - - - - - 3.31 -
-7.83 -4.43 0.07 -1.51 -3.62 -7.84 0.95 0.95 0.3 3.66 -6.12 -5.95 -3.53 -3.84 -5.31 -1.44 -3.06 -4.2 -0.13 -0.6 1.85 -1.21 -2.14 -0.06 -8.1 -7.48 0.09 -3.52
-2.56 -0.1 -0.23 -0.3 -0.75 -0.28 -0.27 -0.65 0.08 -0.4 0.27 -0.23 -0.99 0.58 0.31 0.03 0.93 0.69 0.3 0.37 -0.16 0.52 -0.46 0.9 -1.75 -0.54 0.29 0.04
-3.36 -1.22 -0.89 2.28 -1.62 0.04 -0.39 0.56 -0.4 0.95 0.91 -0.84 0.27 -0.23 -0.44 -0.32 -0.87 -0.04 -0.3 0.8 -0.0 -0.1 -0.18 -0.35 -2.18 -0.23 -0.63 -1.37
- 0.8 - -0.01 - 0.86 -0.11 0.87 - 2.9 - - - - - - - - - - - - 0.38 0.98 0.63 1.53 - 2.47
- - - 4.58 - - - - - - - - - - - 0.11 - - - - 0.7 - - - - - - 0.38
- 1.25 - 3.67 -2.61 -0.7 -1.17 -0.76 -0.74 -1.64 -0.75 -0.49 -1.75 -3.42 -1.16 -0.76 - 0.54 -1.6 -0.3 - -1.44 -2.12 - 1.19 -0.02 - -0.08
-4.78 1.63 -0.87 1.3 -0.12 0.54 -0.46 1.27 0.2 0.69 0.5 0.02 -0.12 -0.58 0.86 -0.26 -2.7 -0.63 -0.0 -0.8 -1.89 -0.39 -2.55 -0.66 -0.33 -0.22 -2.2 -0.25
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-6.73 -3.82 0.82 -2.89 -4.18 -3.51 0.76 0.69 -1.17 3.58 -2.53 -3.97 -0.48 -0.41 -0.9 -1.49 -2.08 -0.72 -1.2 -0.42 0.62 -1.4 -1.39 -0.26 -4.02 -2.66 0.99 -2.08
4.74 - - 0.31 - - - - - - - - - - - - - - - - - - - - - - - -
-4.39 -5.36 -3.4 2.08 0.4 2.1 0.24 1.66 -1.79 -4.01 -1.9 -3.41 -2.7 -4.78 -4.84 1.53 2.11 0.6 -3.0 -1.72 0.17 0.04 -2.12 -1.1 - -4.45 -5.43 -0.71
1.83 1.48 -1.0 -1.55 -1.63 -1.54 -1.05 0.48 -0.29 2.47 -2.21 -2.36 -2.38 0.25 -0.26 -1.54 -0.76 -1.78 -1.16 -0.71 -0.41 -1.45 -1.72 -1.36 0.5 -0.41 1.45 -1.75
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
1.07 0.43 -4.99 -4.6 -0.35 -0.96 -0.22 -2.03 -3.19 0.07 -1.9 0.48 0.3 1.09 0.99 -2.26 -3.21 2.41 -2.26 -1.38 -2.67 -2.18 -4.0 -2.23 2.43 0.05 -1.04 -3.04
-2.67 -0.24 -0.18 0.93 0.0 -0.3 0.57 0.06 0.08 0.8 -0.14 -0.12 0.56 0.32 0.46 -0.05 -1.19 -0.51 -0.97 -0.08 0.08 0.23 0.72 -0.41 -1.52 -1.04 0.48 -0.47
-1.09 -0.45 -0.13 0.31 -0.77 -0.38 1.17 -0.28 0.73 1.46 0.41 -0.21 0.3 -0.92 -0.67 -0.67 -0.18 -0.75 -0.14 0.85 -1.61 -0.13 -0.21 -0.05 -0.94 -0.56 -0.28 0.39
- - -3.57 0.26 - - -3.6 - -3.82 -3.75 - - - - - 2.03 1.99 - -0.75 1.88 3.12 0.62 - 0.58 - - - 1.28
-2.03 0.86 -1.77 0.46 -1.78 -2.64 -1.93 -3.45 -2.53 0.31 -1.07 -1.49 -2.15 1.17 1.33 -0.6 -0.68 -2.15 -0.22 1.73 0.0 0.35 -1.75 0.38 1.47 0.46 0.74 -0.25
-0.95 0.09 -4.07 -0.54 -1.84 -0.84 -0.52 -0.84 0.54 -0.12 1.06 0.55 1.21 1.34 -0.23 0.55 0.02 1.43 0.3 0.06 -1.72 0.24 -1.56 0.51 -2.03 -0.95 -3.5 -1.36
-8.67 -4.89 -1.03 -3.38 -4.87 -4.73 0.19 1.13 1.03 3.73 -0.96 -4.74 -4.27 -3.8 -3.88 -2.01 -3.75 -3.67 -0.93 -1.77 2.27 -1.5 -1.62 -0.21 -5.08 -3.01 -3.8 -3.03
- - - -0.93 - 1.82 -0.09 0.85 0.8 4.04 0.75 - - - - - - - - - - - - - - 0.4 - -
- - - -0.31 - - - - - - - - - - - 2.79 - - 1.05 0.82 3.73 1.67 - - - - - -
-0.15 -0.91 -0.41 1.74 1.13 2.7 -0.14 -2.0 -1.97 -1.45 -2.19 -0.05 -0.54 -1.49 -1.34 -0.56 0.4 1.17 -1.61 -1.39 -1.43 -1.19 -1.77 -1.36 -1.14 -0.87 -0.92 0.48
- - - 0.7 - - - - - - - - - - - - - - - 4.72 - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-3.74 -4.63 -1.59 0.98 -1.13 -0.26 -1.48 2.48 0.54 0.81 1.07 0.4 0.23 -2.14 -4.3 1.28 - -0.53 0.23 -0.89 0.12 -0.58 - -0.19 -0.44 -0.0 -2.16 -0.21
- - - 2.28 - - - - - - - - - 0.09 - - - - 2.88 2.06 - 1.07 - 3.09 - - - -
-0.6 0.54 -1.75 0.34 -1.28 -3.59 -4.35 -2.0 -2.6 -0.34 -2.64 -2.7 -3.62 -1.53 -1.34 -1.22 -2.32 0.86 2.62 1.3 1.92 1.44 -2.45 1.12 -1.18 -3.8 - 0.05
- - 3.4 -0.01 - - 1.33 - - - - - - - - - - 3.45 - - - - 1.59 - - - - -
- 0.27 - 2.24 - - 0.51 - - - - - 3.24 - - - 2.43 - - 1.55 - - - 1.55 - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-2.0 -1.64 0.42 0.86 0.73 1.1 0.58 0.36 0.27 0.2 -0.14 0.77 0.32 -0.42 -0.74 -0.21 0.21 -0.58 -0.36 -0.13 -0.17 -0.18 -0.68 -0.19 -1.58 -1.49 -0.28 -0.03
-3.13 1.18 -7.79 -7.2 -7.52 - -6.72 0.24 2.4 3.42 - -5.81 -8.09 0.3 0.59 -7.68 - -7.86 -7.94 -6.7 -7.09 -8.79 -6.02 -5.44 2.29 -3.96 -0.66 -6.41
-5.31 -0.5 -6.13 -7.01 -7.03 -5.63 -5.27 0.77 2.31 3.82 -5.2 -4.89 -8.03 -0.14 0.04 -5.35 -7.7 -4.39 -5.89 -7.76 -5.96 - -6.39 -6.1 1.99 -4.1 -1.81 -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-0.4 -0.51 -3.07 -5.35 -3.5 -3.46 -2.9 1.24 -0.15 4.34 -3.86 -4.41 -4.1 -3.43 -2.94 -2.5 -3.15 - -2.23 -3.4 -0.75 -2.68 -5.14 -2.4 -2.23 -2.02 -4.02 -5.02
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
-2.83 -3.37 -1.36 -0.83 -0.65 -1.66 -0.27 0.45 1.74 3.62 -1.89 -1.57 -0.17 -3.43 -3.54 -1.68 -2.35 1.12 -1.86 -0.82 -0.2 -1.39 -2.16 -1.46 -3.73 -1.28 -2.2 -1.66
- - - - - - - - - 4.81 - - - - - - - - - - - - - - - - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- -0.29 - 4.65 - - - - - - - - - - - - - 1.04 - - - - - - - - - -
- 1.8 - -0.88 - - - - - - - - 2.85 - 1.06 - - - - - - - - 2.06 - 2.55 2.22 -
-6.45 -7.36 -1.25 -2.68 -5.45 - -0.51 0.5 -1.36 3.44 -7.38 -9.04 -4.77 -5.45 -5.88 -0.94 -5.46 -6.62 0.84 -1.23 3.08 -0.76 -2.79 0.89 -10.14 -10.15 -5.18 -4.6
- -1.22 0.42 1.28 0.11 - - - 1.71 0.23 0.14 - 1.69 0.56 0.3 - - - 1.27 0.37 - 0.44 0.71 - -0.02 1.83 - -
- - - 4.74 - - - - - - - - - - - - - - - - - - - - - - - 0.26
- -3.59 -1.29 -2.84 2.05 0.78 1.12 0.98 0.42 3.03 - 0.93 1.49 - - - - -0.3 0.6 - - -2.29 -3.01 - - - - -0.92
1.54 - - -1.9 - - - - - - - - - 2.09 1.12 - - 3.16 - - - - - - 3.24 - - -
- - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 0.95 - - - - - 4.7 - - - - - - - - - - - - - - - - - -
-5.5 -3.33 -0.55 -1.29 -0.84 -1.64 -1.45 1.45 1.51 3.0 -0.09 -0.39 -2.49 -2.12 -2.43 -0.6 -0.7 -0.86 0.16 0.17 0.5 -0.04 -1.23 0.42 -3.1 -0.86 -1.85 -1.04
-1.77 -2.41 -0.65 0.88 -0.28 1.9 -0.19 2.42 1.0 1.5 0.17 -0.73 -0.6 -3.89 -2.33 -1.02 -1.28 0.12 -3.66 -1.75 -1.37 -3.26 0.74 -2.17 0.38 -2.8 -3.26 -1.12
- - - 0.03 - - - - - - - - - - - - 2.83 - - - - - - - - - - 4.31
- 0.65 - -1.79 - - - - - - - - - 1.15 - - - 3.18 - - - - - - - 2.56 3.17 -
-1.99 -0.41 -0.57 -1.83 -3.25 -2.98 0.89 1.49 -1.4 2.63 -2.89 -5.93 -1.16 -0.29 -0.32 -2.64 -1.28 0.97 -1.86 -1.7 -0.93 -0.69 -2.48 -0.78 1.54 -3.39 1.99 -1.45
- - - -0.89 1.3 0.2 0.93 1.14 - 0.26 - - 1.15 - -0.52 - - 2.52 - - - 0.46 0.66 - 0.02 -0.01 0.43 1.84
- - - 1.88 - - - 2.45 - - - - 2.37 - - - - - - 2.82 - - - - - - 2.72 -
- - 0.47 0.11 - 0.21 -1.69 - 1.5 2.28 1.48 - -0.85 - - - 0.36 - 0.32 - - - - 1.5 -0.97 - - 2.84
- - - -2.03 - 1.54 - - 1.5 - - - - 1.79 1.7 - - 2.86 - - - - 1.17 - - 1.23 1.78 -
- - - -0.05 - - - - - - - - - - - - 2.63 - - 2.21 1.38 - - 0.66 - - - 3.59
- - - - - - - - - 4.81 - - - - - - - - - - - - - - - - - -
- 1.32 - -0.59 - 1.34 2.17 - - - -0.27 0.68 1.71 -1.06 - - - 2.65 0.86 0.16 - - - 0.04 - 0.48 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.