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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.15 | -1.45 | -1.5 | -1.83 | -0.65 | -0.68 | -1.02 | -1.17 | -1.0 | -0.74 | 0.36 | 0.25 | 0.4 | 0.53 | 0.47 | 0.54 | 0.49 | 0.54 | 0.52 | 0.48 | 0.2 | -0.55 | -0.17 | -0.83 | -0.63 | -0.69 | 0.03 | -2.44 | 0.18 | 0.05 | 0.37 | 0.23 | 0.94 | -0.55 | 0.16 | 0.11 | -0.47 | -1.78 | 0.73 | 0.01 | 0.3 | 0.28 | -0.08 | 0.36 | 0.34 | -1.74 | -2.02 | -2.06 | 0.74 | -1.96 | -0.6 | -1.32 | -0.1 | -0.2 | 0.45 | -1.02 | 0.42 | 1.11 | 0.41 | 1.36 | 0.65 | 0.95 | 0.44 | |
| -1.83 | -2.33 | -1.9 | -5.25 | 0.69 | 0.95 | 0.39 | 0.91 | 0.17 | 0.74 | -1.75 | 0.83 | -0.33 | -0.88 | -0.26 | -0.63 | -0.01 | -1.76 | -0.44 | 0.01 | -0.09 | -1.24 | 0.02 | -2.53 | -2.62 | -3.28 | 0.22 | -1.5 | 0.15 | -0.1 | -0.24 | -1.49 | 0.35 | -0.53 | 0.15 | 0.08 | -1.04 | -0.38 | 0.31 | 1.13 | 0.31 | 1.34 | 0.75 | -0.45 | -1.85 | 0.19 | -0.63 | 0.11 | -2.37 | -9.61 | -6.17 | -7.81 | -0.05 | -2.35 | 0.21 | -0.01 | 0.74 | 1.48 | 0.94 | 1.34 | 1.72 | 0.66 | 0.81 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.