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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2.61 | 1.4 | 2.34 | 0.94 | -0.4 | -0.86 | 0.32 | -0.77 | -1.9 | -0.04 | -0.94 | - | -0.84 | -0.11 | -2.41 | -1.18 | -1.39 | -0.16 | 0.24 | 1.18 | -1.44 | -1.78 | -1.69 | -1.86 | -2.89 | -0.24 | -0.48 | -0.05 | -0.9 | -1.01 | -0.78 | -2.01 | 1.56 | -1.43 | -2.09 | 0.04 | 1.85 | -0.2 | 0.57 | - | 0.16 | - | -1.01 | -1.37 | -0.0 | -0.04 | 0.6 | -1.03 | - | - | 1.24 | -0.98 | -0.4 | 2.01 | -0.42 | 0.9 | -0.38 | - | -0.5 | - | 0.6 | - | - | |
| 2.06 | 3.93 | 4.06 | 2.02 | - | - | - | 0.62 | -0.2 | - | 0.72 | - | - | - | - | - | - | - | - | - | - | -0.12 | - | -0.17 | - | - | -0.82 | - | - | - | - | 1.62 | - | - | 0.73 | - | 1.67 | - | - | - | - | - | - | 0.33 | 0.65 | - | - | - | - | - | - | - | - | 2.5 | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.