View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
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0.91 | 3.36 | 1.12 | 0.0 | 0.46 | 2.07 | 1.77 | 1.71 | 2.1 | 2.56 | 16.09 | 0.99 | 0.95 | 90.09 | 0.64 | 62.71 | 0.33 | 84.47 | 0.33 | 14.88 | 9.45 | 4.89 | 3.31 | 3.51 | 0.69 | 7.29 | 20.74 | 12.48 | 0.0 | 1.63 | 0.0 | 41.31 | 16.47 | 7.63 | 0.0 | 0.0 | 1.27 | 6.84 | 17.2 | 26.26 | 15.86 | 38.9 | 0.85 | 0.66 | 82.54 | 10.88 | 8.65 | 6.76 | 1.93 | 0.75 | 0.0 | 4.34 | 0.56 | 102.71 | 9.01 | 5.61 | 7.83 | 11.53 | 9.19 | 7.03 | 34.44 | 25.31 | 54.27 | |
1.61 | 2.64 | 2.73 | 6.5 | 4.96 | 6.72 | 6.05 | 5.61 | 4.92 | 4.42 | 8.92 | 4.23 | 3.28 | 29.79 | 3.36 | 29.96 | 3.24 | 33.56 | 3.91 | 10.4 | 4.62 | 3.81 | 8.77 | 5.96 | 6.2 | 4.03 | 45.99 | 5.32 | 3.45 | 3.22 | 3.87 | 32.24 | 12.17 | 5.85 | 3.29 | 3.56 | 2.83 | 4.21 | 8.93 | 46.82 | 6.48 | 73.9 | 4.55 | 3.32 | 33.41 | 9.4 | 7.54 | 7.44 | 0.07 | 1.69 | 3.63 | 9.48 | 3.84 | 27.21 | 7.07 | 6.38 | 7.05 | 6.46 | 5.65 | 11.79 | 45.73 | 8.53 | 14.16 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)