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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | -O2 early | -O2 late | -O2 middle | 24h,Alfalfa | 24h,Fructose | 24h,Maltose | 24h,Sorbitol | 24h,Xylan | 24h,Xylan+Xylose | 24h,Xylose | Fructose,microbial culture | Laboratory transformant,Pure culture | MjkA KO,expo | MjkA KO,post expo | MjkA/mjkB KO,expo | MjkA/mjkB KO,post expo | MjkB KO,expo | MjkB KO,post expo | MjkB OE,expo | N593 kusA KO,2h | N593 kusA KO,8h | NW186,+1.1mM arg | NW186,+5mM citr | NW186,-Fe | NW305,+10gl Fe | NW305,-Fe | SEB,microbial culture | WT,2h,MM + L-rhamnose | WT,70% max biomass | WT,90% max biomass | WT,expo | WT,post expo | araR KO,2h | araR KO,8h | crhA-G KO,70% max biomass | crhA-G KO,90% max biomass | expo | gaaC KO,2h | gaaR KO,2h | gaaR KO,8h | gaaR/araR KO,2h | gaaR/araR KO,8h | gaaX KO,pure culture | histone deacetylase KO,expo | histone deacetylase KO,post expo | lraA KO,2h,MM + L-rhamnose | lraB KO,2h,MM + L-rhamnose | lraC KO,2h,MM + L-rhamnose | multiploid,asex,free 12h | multiploid,asex,free 6h | multiploid,asex,immob 12h | multiploid,asex,immob 6h | parent,pure culture | post expo | rhaR KO,2h | rhaR KO,2h,MM + L-rhamnose | rhaR KO,8h | rhaR/araR KO,2h | rhaR/araR KO,8h | rhaR/araR/gaaR KO,2h | rhaR/araR/gaaR KO,8h | rhaR/gaaR KO,2h | rhaR/gaaR KO,8h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.95 | -1.59 | -1.39 | -0.26 | -0.88 | 0.48 | -2.75 | -1.02 | -0.43 | -0.54 | 0.03 | -0.29 | -0.63 | 1.35 | -0.82 | 1.12 | -0.13 | 1.6 | -0.17 | -0.15 | -0.19 | 0.45 | -0.19 | -0.97 | 0.16 | -2.23 | 0.3 | -1.24 | -0.31 | -0.32 | -0.65 | 0.68 | 1.61 | -0.63 | -0.92 | -0.66 | -1.05 | 0.68 | 0.07 | 0.38 | 0.61 | -0.17 | -1.99 | -0.88 | 1.75 | -2.25 | -1.6 | -1.23 | -4.03 | -2.4 | -0.74 | -0.86 | -0.71 | 2.75 | -0.16 | -0.49 | -0.28 | -1.35 | -2.1 | -0.17 | 0.4 | 0.2 | 0.3 | |
| -5.07 | -2.1 | -1.95 | -1.86 | -3.17 | -0.72 | -3.14 | -1.75 | -1.76 | -1.17 | -0.64 | -4.36 | -3.6 | 2.16 | -3.07 | 2.39 | -4.12 | 1.86 | -3.46 | 1.16 | -0.27 | 0.13 | -1.78 | -1.59 | -1.32 | -1.94 | 0.6 | -0.85 | -3.96 | -4.16 | -3.01 | 1.93 | 1.25 | 0.84 | -4.1 | -4.21 | -2.27 | -1.84 | 0.03 | 1.61 | -0.84 | 1.67 | -3.43 | -3.82 | 1.67 | -1.08 | 0.24 | 0.2 | - | - | - | - | -3.7 | 0.03 | -0.84 | -0.84 | -1.78 | -0.66 | -0.57 | -0.06 | 2.74 | -0.32 | 1.77 | |
| -1.47 | -1.66 | -1.37 | 0.42 | 0.7 | 0.78 | -0.4 | 0.26 | 1.14 | 0.54 | 0.29 | -0.26 | -0.32 | 0.28 | -0.65 | 0.35 | -0.37 | 0.45 | -0.59 | 0.3 | 0.11 | 0.24 | 0.5 | 1.02 | -0.01 | 0.44 | -0.19 | -1.03 | -0.25 | -0.12 | -0.18 | 0.46 | 0.57 | 0.63 | -0.3 | -0.14 | -0.71 | 0.13 | 0.34 | 0.3 | 0.36 | 0.41 | -0.29 | -0.36 | 0.2 | -1.11 | -1.12 | -0.55 | - | - | - | - | -0.19 | -0.6 | 0.17 | -0.57 | 0.37 | 0.16 | -0.08 | 0.42 | 0.87 | 0.0 | 0.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.