Heatmap: Cluster_13 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
-O2 early
-O2 late
-O2 middle
24h,Alfalfa
24h,Fructose
24h,Maltose
24h,Sorbitol
24h,Xylan
24h,Xylan+Xylose
24h,Xylose
Fructose,microbial culture
Laboratory transformant,Pure culture
MjkA KO,expo
MjkA KO,post expo
MjkA/mjkB KO,expo
MjkA/mjkB KO,post expo
MjkB KO,expo
MjkB KO,post expo
MjkB OE,expo
N593 kusA KO,2h
N593 kusA KO,8h
NW186,+1.1mM arg
NW186,+5mM citr
NW186,-Fe
NW305,+10gl Fe
NW305,-Fe
SEB,microbial culture
WT,2h,MM + L-rhamnose
WT,70% max biomass
WT,90% max biomass
WT,expo
WT,post expo
araR KO,2h
araR KO,8h
crhA-G KO,70% max biomass
crhA-G KO,90% max biomass
expo
gaaC KO,2h
gaaR KO,2h
gaaR KO,8h
gaaR/araR KO,2h
gaaR/araR KO,8h
gaaX KO,pure culture
histone deacetylase KO,expo
histone deacetylase KO,post expo
lraA KO,2h,MM + L-rhamnose
lraB KO,2h,MM + L-rhamnose
lraC KO,2h,MM + L-rhamnose
multiploid,asex,free 12h
multiploid,asex,free 6h
multiploid,asex,immob 12h
multiploid,asex,immob 6h
parent,pure culture
post expo
rhaR KO,2h
rhaR KO,2h,MM + L-rhamnose
rhaR KO,8h
rhaR/araR KO,2h
rhaR/araR KO,8h
rhaR/araR/gaaR KO,2h
rhaR/araR/gaaR KO,8h
rhaR/gaaR KO,2h
rhaR/gaaR KO,8h
-0.04 -0.97 -1.06 0.33 -1.36 -1.81 -1.08 -1.39 -0.64 0.22 -0.91 1.37 1.04 -1.56 0.82 -1.25 1.14 -1.26 1.1 -0.96 0.39 0.72 0.73 0.28 -0.16 0.75 -1.16 -1.32 1.41 1.44 1.27 -1.24 -0.94 0.21 1.47 1.44 -0.05 -2.71 -1.02 -1.59 -0.68 -1.47 1.12 1.14 -1.32 -2.99 -3.25 -2.89 -6.03 0.37 -2.5 -0.08 1.11 -1.12 -1.16 -0.83 0.52 0.27 -0.15 -0.91 -2.07 -1.61 -2.97
-0.41 -0.28 0.3 -1.52 -0.58 -0.12 -0.64 0.07 -0.58 -0.45 0.53 0.16 0.37 -2.03 0.17 -2.07 0.4 -2.75 0.37 0.11 0.21 -1.38 -0.61 -2.43 -2.49 -4.12 -0.3 0.17 0.79 0.9 0.34 -2.43 -0.42 -0.49 0.99 1.1 -0.17 -0.47 -0.05 -0.62 -0.75 -0.32 -0.08 0.3 -2.38 0.73 1.81 1.44 -2.17 -8.52 -2.57 -9.89 0.11 -2.82 0.93 0.96 0.8 0.47 0.78 0.29 0.16 0.96 0.26
1.07 0.94 0.63 1.17 0.23 0.01 -0.34 -2.05 -2.08 -2.14 2.96 1.02 -0.29 -2.3 - 1.45 0.02 1.11 -0.22 - 0.68 - - - - - -0.05 - -1.15 -0.2 -0.23 1.96 - - 0.11 -0.07 0.9 -0.38 -0.61 - -0.62 - 0.22 -1.61 0.62 0.77 0.82 - - -2.39 0.47 2.0 -0.4 -0.73 -0.02 - -0.58 -0.12 -0.67 - -1.59 1.22 -
1.14 0.7 1.01 -0.56 -2.94 -0.64 -0.73 -2.67 -2.8 -1.17 -0.85 -0.7 -2.93 -2.64 -1.11 -3.67 -0.72 - -2.84 -0.59 -1.95 -2.29 -0.45 -0.44 -2.29 -0.75 -0.03 2.46 -1.39 -2.45 -0.68 -2.51 - -0.93 -1.95 -1.08 0.12 1.97 0.4 1.17 -0.93 1.66 -1.28 -1.6 -0.51 -1.53 0.32 -2.53 -0.52 -1.7 -0.84 -0.9 -1.39 -1.31 1.33 -0.01 -0.09 0.6 -0.67 0.4 2.31 1.1 2.52
-6.51 -3.46 - -3.23 - -5.87 -4.65 -4.25 - - - -3.06 - -5.7 - - - - - -0.18 -0.39 -6.42 - -4.85 - - -2.89 5.63 - - - - -0.71 -0.02 - - - 0.81 -2.44 -0.43 - -1.43 -6.19 - -4.59 -0.71 1.42 -3.62 - - - - - -4.21 -1.01 -3.69 -0.12 -0.41 -1.61 -4.02 -1.67 - -2.7
-1.43 -1.67 -0.87 1.09 0.72 0.54 0.4 1.07 -0.55 0.69 2.06 1.16 0.75 -0.02 0.35 -0.14 0.77 -0.36 0.22 -3.77 -1.45 1.56 2.43 0.55 1.04 0.06 -1.29 -2.26 0.48 0.98 -0.48 -1.08 -3.39 -3.22 0.92 1.17 -0.41 -4.59 -3.13 -4.62 -3.48 -2.86 1.7 0.35 -0.39 -2.73 -0.09 -0.87 - - - - 1.88 -3.05 -5.61 -2.07 -1.79 -4.51 -1.49 -3.06 -5.79 -4.6 -4.36
-1.26 -0.12 -1.11 -1.57 -1.77 -2.38 -1.61 -1.44 -0.83 -3.74 -2.87 0.86 -3.35 -3.04 -3.34 - -3.32 - -2.31 2.25 3.81 -3.76 -2.2 -1.45 -2.73 -2.2 -2.49 -0.96 -2.89 -1.89 -3.31 - -1.37 4.19 -2.86 -2.78 -1.35 0.88 -2.36 -0.36 -1.37 -0.77 -1.94 -1.3 -1.36 0.04 -1.93 - - - -2.28 - -1.82 -1.48 -0.76 -0.44 -0.74 -0.79 2.39 -1.36 -2.33 -2.33 -0.77
0.16 0.19 0.1 0.66 -0.76 -1.02 -0.86 -0.72 -0.88 -0.63 -1.36 0.61 -0.11 -1.63 -0.0 -1.49 0.01 -1.28 0.3 0.37 -0.5 1.29 0.74 0.31 0.19 0.71 -1.19 -0.13 0.56 0.63 0.4 -1.21 0.51 -0.25 0.58 0.85 0.36 0.78 0.06 -1.09 0.32 -0.91 0.19 0.14 -1.23 -0.44 -0.17 -0.45 -0.62 -0.43 1.23 -0.13 0.43 -0.58 0.13 0.42 -0.63 0.5 -1.26 -0.12 -1.38 0.1 -1.36
-1.66 -0.27 0.14 -2.18 -0.62 1.43 -0.81 0.03 -0.46 1.06 1.13 -2.53 -2.44 -0.84 -2.1 -1.0 -2.05 0.02 -2.02 1.0 1.0 -1.76 0.05 -2.06 -3.12 -2.9 0.94 -0.04 -1.02 -1.26 -2.47 -0.5 0.29 0.01 -1.09 -1.08 -1.14 0.37 0.93 0.04 -0.3 0.6 -2.13 -2.46 -0.45 0.1 0.23 -0.11 - - -6.58 -8.22 -2.62 -0.1 1.61 0.95 1.72 1.52 0.77 1.53 -0.81 1.75 0.72
-0.33 -0.36 0.55 2.0 -0.43 -0.21 -0.42 -0.17 -1.33 -0.67 0.67 0.13 -0.85 -0.2 -1.15 -0.22 -0.63 -0.11 -1.22 -0.32 -0.71 0.03 1.46 -0.19 -0.1 -0.7 0.08 0.08 0.31 0.36 -1.56 -0.24 -1.36 -1.67 0.36 0.2 -0.67 -0.62 0.36 -0.89 -1.66 -0.57 -0.37 -0.99 0.11 0.15 1.9 1.07 -9.16 -4.4 -0.11 -2.15 -0.24 -2.09 0.54 0.71 0.11 0.49 -0.5 1.55 -1.98 0.88 -0.45
0.35 1.45 1.32 1.37 -0.44 -0.52 -0.8 -0.68 -0.12 -0.76 2.96 -0.96 -1.24 -0.22 -0.67 -0.01 -0.56 0.0 -0.84 -0.97 -0.52 - - - - - -0.57 0.23 -0.69 -0.24 -1.38 -0.47 -1.39 -0.65 -0.22 -0.34 0.22 -0.52 -0.6 -1.51 -0.45 -0.74 -0.95 -0.74 -0.14 0.47 2.5 1.72 -6.59 -5.37 -1.2 -5.16 -0.74 -1.01 -0.24 1.32 0.05 0.39 -0.24 0.17 -1.61 0.46 -1.04
-0.09 -0.22 -0.03 0.83 -0.82 -0.87 -0.56 -1.21 -0.88 -0.66 0.16 -1.39 -0.87 -0.57 -1.1 -0.9 -0.97 -0.83 -1.09 0.97 -0.66 0.75 0.35 -0.59 0.82 0.13 -0.53 1.5 -0.44 -0.27 -0.99 -0.66 1.45 -1.25 -0.48 -0.47 -0.92 0.55 1.64 -1.15 0.06 -0.92 -0.43 -0.89 -0.52 0.54 0.13 0.44 -3.28 -2.5 -0.28 -0.87 -0.82 -0.8 1.11 0.55 0.16 1.01 -0.28 0.92 -0.58 1.57 -0.03
-1.74 -2.31 -2.83 -0.09 -1.57 -2.34 -2.78 -1.75 -0.74 -1.2 2.28 -0.33 -1.04 -0.53 -1.29 -0.16 -1.02 -0.37 -0.8 0.7 0.37 -1.6 -0.12 -0.88 -1.36 -1.55 1.37 -1.29 -1.39 -0.94 -0.62 -0.27 1.53 0.86 -1.01 -0.91 -2.11 -0.74 0.95 -0.44 1.49 -0.09 -0.35 -0.96 -0.5 -1.72 -1.72 -2.14 -5.75 -2.52 -1.26 -0.27 -0.42 -2.36 1.02 -0.21 1.55 2.1 1.26 2.39 -0.78 0.71 -1.18
- - -1.64 - -1.79 -0.19 - -2.77 - - - - - - - -0.04 - 2.0 - 1.47 -0.9 - -2.3 -2.27 -2.33 - 1.77 - - - - 0.53 1.7 - - - -0.76 2.18 -0.88 -0.87 - 1.13 -2.04 - 1.36 - - - - - - - - 3.81 2.95 -0.54 1.48 2.54 0.65 - -0.85 - -
-0.1 -1.23 -0.96 0.59 0.39 1.39 -1.2 0.91 0.33 0.72 1.1 -0.14 -0.54 -0.09 -1.31 -1.07 -1.57 0.02 -2.7 1.14 -0.48 1.04 1.0 -1.49 0.52 -2.58 2.42 -0.39 -0.59 -0.45 -0.92 -0.48 1.3 -1.2 -1.38 -0.46 -0.19 0.61 0.74 -0.61 -0.21 0.3 -0.09 -0.83 -0.77 -1.07 -1.35 -1.06 - - - - -0.52 -0.0 -0.07 -0.13 -0.42 -0.14 0.07 0.47 -0.3 1.33 -0.96
-6.85 -6.02 -6.95 -6.06 -8.47 -1.91 -7.64 -7.38 -8.67 -7.12 -4.33 -7.55 -7.33 -1.1 -8.33 -1.11 -7.61 -0.81 -7.68 3.31 -0.05 -5.37 -7.51 -8.5 -7.37 -7.6 0.3 0.68 -8.35 -7.33 -7.59 -1.02 1.47 1.21 -7.93 -7.56 -7.64 -0.97 -1.73 1.83 -3.4 1.87 -8.5 -7.51 -0.98 -1.21 -1.33 -3.16 -9.06 -11.42 -10.57 - -8.96 -3.24 2.36 -3.39 0.72 2.24 2.36 -0.52 2.74 -0.36 2.84
-0.12 -0.94 -1.21 0.99 -0.93 -1.28 -1.12 -1.56 -1.36 -0.97 -2.04 0.22 0.61 0.24 -0.14 0.71 0.61 1.09 0.54 0.91 -1.39 0.1 0.36 -0.7 -0.79 -0.13 -0.93 -0.73 0.59 0.67 0.47 0.23 0.99 -0.24 0.27 0.42 -0.05 -0.79 0.59 -0.52 1.15 -0.24 -0.03 0.27 0.92 -0.85 -1.09 -0.6 -1.64 -3.47 -2.62 -2.45 -0.07 1.25 0.31 -0.56 -0.76 0.65 -2.44 0.97 -0.42 0.75 -0.87
- - -0.19 1.36 1.34 - 0.95 0.26 0.68 0.15 - 1.22 -0.44 - - 1.85 -0.37 - -0.37 0.59 - -0.77 - 0.18 0.21 - 0.49 - - 0.05 0.63 - - - -0.09 0.01 -0.05 - 1.59 0.59 - - - - 0.01 - - - 1.18 - 3.98 1.03 - - - - - - - 1.58 0.61 - 0.58
- - - 5.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.36 1.26 0.83 -1.37 -1.81 -1.12 -0.92 -1.4 -1.41 -1.09 2.72 -2.05 -2.13 -0.09 -1.99 -0.28 -2.45 0.52 -2.08 0.61 1.16 1.26 0.8 0.49 0.21 -1.45 0.45 0.53 -2.36 -1.96 -2.17 -0.28 -0.66 2.45 -2.09 -2.06 -0.05 -0.43 -1.5 0.26 -0.91 -1.21 -1.83 -2.12 -0.26 -1.95 0.31 -0.93 -2.17 -3.72 -1.28 -3.24 -1.99 -1.87 0.19 -0.6 0.27 -1.36 1.29 -0.9 -0.58 -0.64 2.56
-1.35 -1.85 -1.26 -1.3 -1.49 -1.89 -1.29 -0.9 -1.66 -1.08 -1.02 1.85 1.3 -2.36 0.62 -2.1 1.33 -0.8 1.37 0.36 0.31 -0.65 -0.51 -0.4 -0.19 0.34 -0.57 -0.71 1.8 1.71 1.07 -3.28 0.78 -0.51 1.91 1.45 0.36 - - -3.67 0.4 -2.66 1.79 0.9 -4.26 -1.29 0.35 -0.94 -4.08 - - - 2.07 0.61 -3.66 -0.76 -1.33 -2.18 -1.41 -0.51 -3.64 -2.65 -2.06
-4.8 -6.97 -6.77 -1.85 -3.67 -1.88 -3.27 -2.4 -2.75 -1.6 0.41 1.17 -0.04 -2.64 -0.26 -2.54 0.02 -2.31 -0.04 -2.72 0.96 3.83 2.96 0.58 -0.36 0.58 -0.33 -2.98 0.53 0.71 1.07 -2.66 -2.29 -0.31 0.95 1.08 -3.77 -5.63 -3.34 -1.25 -0.74 -0.49 0.12 0.7 -2.66 -3.81 -3.22 -3.65 -6.42 -2.23 -4.68 -1.83 -0.2 -3.97 -3.48 -4.04 1.99 -0.49 0.73 -1.8 -0.37 -2.88 -2.08
-5.98 -7.59 -8.17 1.79 0.04 -0.37 0.49 0.05 -0.33 0.23 2.82 -0.81 0.11 -9.12 0.5 -5.56 0.36 -5.4 0.32 -5.06 -1.37 0.97 2.25 1.85 -0.39 2.76 0.7 -2.89 0.96 0.89 1.0 -8.0 -4.61 -3.95 1.07 0.93 -2.73 -1.53 -2.52 -4.01 -0.07 -4.01 0.22 0.51 -7.4 -3.49 -4.27 -4.09 - - - - 0.0 -9.22 -1.1 -0.83 0.5 -1.46 -0.61 -0.37 -1.45 -1.61 -2.48
-1.0 -1.02 -0.58 -4.68 -4.66 -0.74 -4.15 -2.28 - -1.8 -3.17 -1.74 - -2.24 - -1.95 -6.42 -2.86 -4.79 1.57 1.43 -2.26 -2.47 -4.88 -5.28 -6.89 -1.22 2.65 -5.93 - - -1.6 -0.23 1.64 -6.13 -5.88 -2.08 2.9 -3.46 -1.55 -3.48 -1.55 -5.05 -6.36 -1.34 -0.82 1.1 -2.47 - - - - -5.68 -2.32 1.89 -1.13 3.53 0.59 2.92 -2.66 1.21 -2.12 1.2
-7.26 - -4.95 -1.28 -6.16 -5.04 -4.98 -4.26 -6.21 -4.36 -4.7 2.23 -6.79 -1.94 -4.19 -4.19 -6.73 - - 1.97 0.27 -3.07 -3.92 - -4.87 -7.15 -2.27 1.48 -6.24 - -4.72 -3.78 0.54 -0.42 - -5.26 -5.39 3.87 -3.44 -3.76 -4.2 -4.77 -2.29 -5.67 -2.54 -1.68 -1.87 -5.37 - - - - -4.54 -1.34 3.54 -3.44 2.74 2.5 2.51 -4.77 -3.42 -3.42 -2.43
-1.18 -0.08 0.49 -0.98 -1.36 0.51 -0.38 -0.56 -1.33 0.81 2.13 -1.61 -1.55 0.79 -1.22 0.72 -1.09 0.56 -1.27 0.03 0.09 0.31 1.15 -0.84 0.42 -0.52 0.08 -0.96 -0.69 -0.59 -2.33 -0.07 0.19 -1.12 -0.62 -0.68 -0.04 0.2 0.23 -0.9 -0.85 -0.57 -1.37 -1.9 0.11 -0.44 -0.91 -1.43 -4.24 -6.93 -0.62 -3.54 -1.72 -1.52 0.84 0.06 1.41 1.42 1.02 0.67 -0.35 2.06 0.51
-3.55 -1.51 -2.09 -1.54 -1.35 -0.82 -1.05 -0.7 -0.74 -0.68 -0.99 - - 1.72 -4.07 2.48 - 1.45 -2.98 0.42 0.29 -0.85 -0.99 -3.1 -2.04 -3.25 0.35 0.86 - -3.63 - 1.28 -0.34 -2.07 -4.23 -3.22 -3.38 -0.83 0.44 0.75 0.67 0.97 -5.82 - 1.87 0.99 0.49 1.15 - - - - -6.42 1.64 0.17 -0.07 1.19 0.01 0.96 -0.01 1.28 0.55 1.86
0.29 1.5 1.98 - -1.37 0.25 -2.22 -0.8 -1.32 -0.76 0.88 -2.05 - -1.79 - -3.44 - -0.62 - 0.51 -2.7 -1.75 -1.95 -2.12 -2.1 - 0.22 0.29 - - - -1.7 1.11 - -2.19 - -0.28 - 2.01 2.02 -1.71 0.48 - - -2.27 -0.29 0.07 - - - - - -3.46 1.03 1.23 0.45 -1.08 0.68 -1.74 1.63 3.04 1.04 2.73
-1.42 -0.97 -1.28 0.59 -0.86 0.39 -1.07 -0.45 -0.74 0.07 -0.23 1.79 -0.07 - -1.52 -2.67 -1.31 - -4.47 0.68 0.71 -0.25 -0.54 -0.79 -0.11 -1.6 -0.78 0.04 -0.45 -0.51 -0.54 -2.54 1.05 -1.53 -0.83 -0.03 -1.21 0.87 2.36 -1.2 1.43 -1.52 -1.23 -0.98 -1.09 -0.81 -0.28 -0.31 - -4.29 -1.12 - -0.45 -3.23 2.47 1.06 0.6 1.59 -0.58 1.07 -2.49 1.75 -0.92
-2.27 -0.77 -0.74 -3.97 0.73 -0.72 -2.82 -0.66 -0.52 -1.17 4.39 -6.7 -5.77 1.06 -5.75 1.78 -4.97 1.24 -5.27 -2.63 -1.55 -3.7 -2.98 -3.67 -2.18 -2.65 2.3 -2.05 -5.27 -5.32 -6.27 1.7 -1.89 -0.95 -6.84 -5.83 -2.44 -4.52 -4.33 1.41 -1.83 1.5 -5.51 -7.34 1.14 -2.37 -3.32 -3.35 - - -3.67 - -5.54 2.44 -3.16 -0.76 -1.79 -2.95 -2.31 -1.64 0.69 -3.14 -1.51
-0.39 -0.2 -0.08 -0.05 0.26 -0.07 -0.94 -0.77 0.32 -0.28 -0.41 -0.18 -1.17 -1.37 -1.32 -1.41 -1.11 -1.42 -1.15 1.79 1.73 -0.19 -0.33 -0.2 -0.7 -0.19 -0.41 -0.84 -0.64 -0.69 -1.26 -1.08 -0.62 0.6 -0.65 -0.68 -0.62 1.31 -1.48 -1.31 -0.45 -1.05 -0.66 -1.24 -1.05 -1.28 -1.18 -1.16 -2.88 -2.71 -1.49 -2.01 -0.72 -0.28 3.35 -1.09 2.35 0.39 1.41 -1.11 -0.89 -1.66 -0.78
-7.76 -7.26 -6.85 -4.21 -8.72 -5.36 -9.18 -6.19 -8.21 -4.26 -5.69 -0.43 -7.09 -3.9 -8.07 -4.46 -8.45 -4.89 -7.42 2.37 2.31 -5.87 -5.95 -7.74 -9.45 -6.68 -2.58 -1.47 -9.62 -7.08 -7.43 -4.73 -1.17 0.91 -9.75 -6.43 -6.15 1.99 -5.17 -4.38 -5.51 -4.33 -2.89 - -4.3 -5.89 -4.48 -6.35 - - - -9.64 -9.87 -1.03 4.27 -5.95 3.56 1.81 3.18 -5.18 -3.47 -4.36 -3.63
-0.42 -3.22 -3.27 2.21 -2.02 -1.03 -1.37 -0.53 -1.56 -0.67 -1.55 0.2 -0.3 -1.55 -0.63 -1.44 -0.2 -0.75 -0.05 -0.39 0.08 2.53 2.59 -0.45 1.71 -0.2 -1.3 -1.07 -0.28 -0.2 -0.19 -1.04 -0.68 -0.4 -0.09 -0.15 -1.06 -0.7 -0.89 -1.39 0.89 -0.72 0.08 -0.36 -1.23 -1.58 -0.57 -0.14 -0.24 -0.18 1.89 0.58 -0.07 -1.8 -1.13 -0.94 0.64 -0.58 0.33 -1.19 -1.32 -1.24 -1.58
-2.83 -1.77 -1.84 -2.47 -0.42 1.88 1.13 0.43 -0.29 -0.07 0.04 0.83 0.87 1.95 0.26 0.91 0.11 1.29 0.03 -1.91 -0.88 1.02 1.08 0.05 1.23 -1.24 -0.4 -1.54 0.05 0.42 0.49 0.45 -2.68 -1.45 0.42 0.58 -1.31 -3.47 -1.93 -0.55 -1.01 -0.04 0.29 1.04 1.32 -1.28 -1.23 -1.15 -1.41 - -3.17 - 0.37 0.77 -1.78 -4.92 0.17 -2.31 -0.67 -2.93 0.02 -2.23 -0.28
-1.37 -0.56 -0.7 -3.34 -0.42 1.42 0.84 0.35 -0.91 -0.3 -0.68 1.26 0.99 1.31 0.61 0.85 0.85 0.64 0.62 -1.24 -0.24 0.31 0.41 -0.09 0.98 -0.56 -0.3 -2.28 0.74 0.75 0.85 0.19 -1.36 -1.97 0.76 0.79 -1.05 -2.64 -0.68 -0.34 -0.6 -0.48 0.96 0.89 0.66 -1.67 -1.1 -1.24 -1.15 -7.53 -2.97 -8.05 0.96 -0.24 -1.15 -2.16 0.09 -1.67 -0.52 -0.69 -0.2 -0.97 -0.45
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.