Heatmap: Cluster_101 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
HJ48,hypha
HJ48,hypha,anaero/96h
HJ48,hypha,glu,anaero/96h
HJ48,hypha,xyl,anaero/96h
KO,mycelia,cellu
KO,mycelia,glu
KO,mycelia,gly
KO,mycelia,sopho
KO,mycelia,sugarcane
M124,16h
M124,24h
M124,40h
M124,64h
M307,16h
M307,24h
M307,40h
M307,64h
M362,16h
M362,24h
M362,40h
M362,64h
M7,16h
M7,24h
M7,40h
M7,64h
M727,16h
M727,24h
M727,40h
M727,64h
M76,16h
M76,24h
M76,40h
M76,64h
QM6a,WT,glu,0h
QM6a,WT,lac,24h
QM6a,WT,lac,48h
QM6a,WT,mycelia,cellu,dark
QM6a,WT,mycelia,cellu,light
QM6a,WT,mycelia,dark
QM6a,WT,mycelia,light
QM6a,mycelia
QM6a,mycelia,glu
QM6a,mycelia,gly
QM6a,mycelia,sugarcane
QM9414,WT,2h
QM9414,mycelia
QM9414,xyr1/ara1 KO,2h
QM9978,cellulase-,glu,0h
QM9978,cellulase-,lac,48h
Rut-C30
Rut-C30,24h
Rut-C30,SEB
Rut-C30,SEB,24h
Rut-C30,mycelia
Tu-6
Tu-6,glu
Tu-6,kap8 KO,gly,0h
Tu-6,kap8 KO,sopho,3h
Tu-6,mycelia,sugarcane
Tu-6,sugarcane
WT,mycelia,cellu
WT,mycelia,glu
WT,mycelia,sopho
ace3 KO,mycelia
ara1 KO
azf1 KO,glu
azf1 KO,mycelia,sugarcane
azf1 KO,sugarcane
cre1 KO
cre1 KO,mycelia
gpr8 KO,mycelia,cellu,dark
gpr8 KO,mycelia,cellu,light
kap8 KO,gly,0h
kap8 KO,sopho,3h
xki1 KO
xyr1 KO
ypr2 KO,mycelia,dark
ypr2 KO,mycelia,light
6.58 52.91 6.02 32.29 117.61 56.61 68.3 109.38 74.58 52.15 45.57 53.38 49.15 40.47 51.31 70.08 55.45 78.68 85.36 62.26 51.26 49.77 62.2 53.33 56.47 44.92 42.23 59.62 40.09 51.07 58.44 46.48 64.52 45.94 51.51 61.28 84.07 107.37 80.56 98.78 70.24 43.65 61.27 58.62 57.59 52.66 72.48 33.95 54.87 35.04 97.1 119.26 105.14 38.72 30.01 39.86 60.33 99.76 89.79 71.43 87.23 98.24 107.03 36.05 44.24 58.82 72.65 63.62 47.69 63.65 90.58 103.67 76.49 99.21 50.68 59.55 71.21 94.37
6.35 17.97 5.66 16.4 60.41 20.93 35.23 37.78 31.57 17.39 19.98 29.01 29.03 14.63 23.35 28.83 29.92 12.99 19.46 27.73 39.96 19.36 21.7 22.03 31.29 13.43 14.14 22.92 28.29 19.69 28.17 27.98 43.2 23.2 25.33 19.11 26.67 34.53 47.89 48.43 32.2 19.43 28.79 27.1 32.73 26.46 33.47 24.84 24.4 11.73 39.99 44.63 35.44 11.36 22.42 20.09 17.01 47.71 35.15 28.19 41.08 29.32 47.68 16.53 22.41 22.79 37.76 38.64 20.31 25.31 34.25 32.69 30.95 43.03 23.18 25.63 42.5 50.33

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)