Heatmap: Cluster_111 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene	HJ48,hypha	HJ48,hypha,anaero/96h	HJ48,hypha,glu,anaero/96h	HJ48,hypha,xyl,anaero/96h	KO,mycelia,cellu	KO,mycelia,glu	KO,mycelia,gly	KO,mycelia,sopho	KO,mycelia,sugarcane	M124,16h	M124,24h	M124,40h	M124,64h	M307,16h	M307,24h	M307,40h	M307,64h	M362,16h	M362,24h	M362,40h	M362,64h	M7,16h	M7,24h	M7,40h	M7,64h	M727,16h	M727,24h	M727,40h	M727,64h	M76,16h	M76,24h	M76,40h	M76,64h	QM6a,WT,glu,0h	QM6a,WT,lac,24h	QM6a,WT,lac,48h	QM6a,WT,mycelia,cellu,dark	QM6a,WT,mycelia,cellu,light	QM6a,WT,mycelia,dark	QM6a,WT,mycelia,light	QM6a,mycelia	QM6a,mycelia,glu	QM6a,mycelia,gly	QM6a,mycelia,sugarcane	QM9414,WT,2h	QM9414,mycelia	QM9414,xyr1/ara1 KO,2h	QM9978,cellulase-,glu,0h	QM9978,cellulase-,lac,48h	Rut-C30	Rut-C30,24h	Rut-C30,SEB	Rut-C30,SEB,24h	Rut-C30,mycelia	Tu-6	Tu-6,glu	Tu-6,kap8 KO,gly,0h	Tu-6,kap8 KO,sopho,3h	Tu-6,mycelia,sugarcane	Tu-6,sugarcane	WT,mycelia,cellu	WT,mycelia,glu	WT,mycelia,sopho	ace3 KO,mycelia	ara1 KO	azf1 KO,glu	azf1 KO,mycelia,sugarcane	azf1 KO,sugarcane	cre1 KO	cre1 KO,mycelia	gpr8 KO,mycelia,cellu,dark	gpr8 KO,mycelia,cellu,light	kap8 KO,gly,0h	kap8 KO,sopho,3h	xki1 KO	xyr1 KO	ypr2 KO,mycelia,dark	ypr2 KO,mycelia,light
EGR45722	996.27	1.73	1205.7	617.24	5.38	30.78	5.87	2.72	5.27	10.98	3.81	2.71	4.88	19.23	10.67	2.82	7.7	9.14	7.09	5.42	5.8	18.8	3.72	3.37	4.69	12.94	8.2	7.35	6.58	17.52	6.17	4.16	10.36	42.99	46.92	6.88	31.76	19.0	13.21	15.07	33.94	6.52	8.6	8.89	12.39	6.21	6.16	45.27	5.06	10.01	59.12	79.23	28.84	27.44	5.32	5.58	4.84	9.91	8.33	6.88	12.43	38.0	4.11	3.85	10.04	4.52	5.48	4.88	9.14	34.85	17.26	18.04	11.42	5.62	11.55	8.32	15.0	12.31
EGR52476	6.94	0.18	6.35	3.31	0.1	0.54	0.03	0.05	0.08	0.0	0.28	0.2	0.17	0.19	0.5	0.38	0.35	0.22	0.19	0.83	0.51	0.45	0.02	0.45	0.37	0.08	0.29	0.38	0.76	0.48	0.42	0.41	0.51	0.13	0.05	0.24	0.55	0.2	0.02	0.2	0.12	0.66	0.01	0.02	0.1	0.1	0.15	0.3	0.03	0.01	0.0	0.02	0.0	0.1	0.29	0.11	0.07	0.08	0.15	0.05	0.42	0.74	0.32	0.0	0.07	0.11	0.15	0.21	0.07	0.37	0.15	0.21	0.27	0.02	0.07	0.01	0.03	0.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)