Heatmap: Cluster_43 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
HJ48,hypha
HJ48,hypha,anaero/96h
HJ48,hypha,glu,anaero/96h
HJ48,hypha,xyl,anaero/96h
KO,mycelia,cellu
KO,mycelia,glu
KO,mycelia,gly
KO,mycelia,sopho
KO,mycelia,sugarcane
M124,16h
M124,24h
M124,40h
M124,64h
M307,16h
M307,24h
M307,40h
M307,64h
M362,16h
M362,24h
M362,40h
M362,64h
M7,16h
M7,24h
M7,40h
M7,64h
M727,16h
M727,24h
M727,40h
M727,64h
M76,16h
M76,24h
M76,40h
M76,64h
QM6a,WT,glu,0h
QM6a,WT,lac,24h
QM6a,WT,lac,48h
QM6a,WT,mycelia,cellu,dark
QM6a,WT,mycelia,cellu,light
QM6a,WT,mycelia,dark
QM6a,WT,mycelia,light
QM6a,mycelia
QM6a,mycelia,glu
QM6a,mycelia,gly
QM6a,mycelia,sugarcane
QM9414,WT,2h
QM9414,mycelia
QM9414,xyr1/ara1 KO,2h
QM9978,cellulase-,glu,0h
QM9978,cellulase-,lac,48h
Rut-C30
Rut-C30,24h
Rut-C30,SEB
Rut-C30,SEB,24h
Rut-C30,mycelia
Tu-6
Tu-6,glu
Tu-6,kap8 KO,gly,0h
Tu-6,kap8 KO,sopho,3h
Tu-6,mycelia,sugarcane
Tu-6,sugarcane
WT,mycelia,cellu
WT,mycelia,glu
WT,mycelia,sopho
ace3 KO,mycelia
ara1 KO
azf1 KO,glu
azf1 KO,mycelia,sugarcane
azf1 KO,sugarcane
cre1 KO
cre1 KO,mycelia
gpr8 KO,mycelia,cellu,dark
gpr8 KO,mycelia,cellu,light
kap8 KO,gly,0h
kap8 KO,sopho,3h
xki1 KO
xyr1 KO
ypr2 KO,mycelia,dark
ypr2 KO,mycelia,light
-6.87 -1.14 -6.18 -2.37 -1.14 0.04 -1.27 0.39 -0.83 1.39 0.44 -1.58 -2.97 0.01 0.69 -0.85 -1.76 0.52 -0.05 -1.45 -1.58 0.15 -0.25 -1.19 -2.01 1.09 0.49 0.04 -2.18 0.11 -0.31 -1.04 -2.23 0.76 0.94 1.27 1.64 -1.41 0.73 -0.74 0.73 0.27 -1.1 -1.07 -0.17 -0.56 -0.67 1.15 1.08 -0.67 -3.69 -1.8 -1.31 -2.85 -1.2 -0.96 -0.53 1.82 -0.43 -0.59 -0.37 1.58 1.3 0.77 -0.69 -0.47 -0.8 -0.97 -0.81 0.58 0.96 -1.25 -0.66 1.75 -0.66 -1.56 0.96 -0.68
- -1.92 - -3.66 2.95 -0.31 -1.39 -0.17 -1.7 - -2.4 - - - 0.05 - - -0.92 -1.46 -1.93 - - 1.71 -2.21 0.31 -1.05 - -2.21 - -2.33 0.54 -0.92 0.52 0.16 -1.2 0.98 0.32 -0.58 1.29 0.53 -0.16 -0.06 -0.79 -0.59 -2.5 -2.28 1.99 -0.03 -0.81 -3.51 -3.34 -1.73 -3.34 -3.12 - -3.15 -4.14 -1.09 -1.46 -3.04 - 1.0 4.66 -0.89 -3.08 -2.13 -2.05 -1.95 -2.72 -2.48 0.69 -0.07 -1.77 -1.51 -2.24 -2.53 1.21 0.01
- -7.15 -6.99 -3.86 1.4 -2.61 -0.01 -0.61 -1.54 -1.59 -0.39 -0.13 -1.02 -1.33 -0.18 0.08 -0.58 -1.22 -0.46 -0.34 0.11 -0.77 0.55 0.01 -0.87 -2.58 -0.2 0.07 -0.13 -0.54 -0.76 -0.21 -0.9 1.5 1.78 1.51 0.74 0.49 0.01 0.88 1.58 -3.15 -0.08 -1.58 -1.11 -2.81 -0.88 2.84 2.58 -2.27 -2.05 -0.11 -0.16 -0.63 -1.69 -2.35 -0.59 1.24 -4.02 -3.84 -1.3 -0.62 2.85 -4.16 -3.05 -2.09 -2.98 -2.79 -3.14 -2.6 -0.65 0.32 -1.82 -0.67 -2.86 -2.79 -0.14 0.85
2.04 -3.87 2.02 1.95 0.33 -1.12 1.01 0.4 -0.34 -0.37 -0.42 -2.63 -3.74 -1.84 0.07 -0.57 -1.85 -0.29 0.35 -1.43 -1.42 -1.26 0.05 -0.98 -4.19 -0.27 -0.28 -0.08 -1.62 -1.1 0.23 -1.68 -2.35 1.72 1.48 1.61 1.26 -2.26 0.87 -1.97 1.03 -1.95 0.3 -0.52 -0.75 -0.71 -0.26 1.74 2.26 -6.01 -5.28 -2.37 -3.67 -4.34 -1.05 -1.03 -3.36 0.45 -0.75 -0.79 -0.18 -1.55 1.22 -1.82 -1.09 -0.34 -0.79 -0.79 -1.33 -0.56 0.6 -2.77 -1.46 0.45 -0.77 -0.99 0.86 -1.85
- -2.01 -4.9 -3.76 -0.82 -0.64 -5.61 2.32 -5.59 -0.0 -0.52 -3.38 - -1.82 -0.58 -1.18 - -1.63 -1.17 -2.05 - -2.33 -2.19 -1.23 - 0.55 -1.07 -0.79 - -0.64 -3.12 -2.0 - -2.91 -3.98 -2.36 -1.11 - -1.15 - -1.68 -3.0 -4.67 -2.49 -2.59 -3.11 2.73 -1.36 -1.89 -4.59 -4.42 -5.44 -4.37 -2.2 -0.31 -0.14 0.07 1.43 1.08 0.62 0.26 3.01 4.02 -0.35 -0.34 0.06 0.21 0.49 -0.52 1.84 -0.54 -5.75 0.12 2.44 0.34 -1.9 -2.92 -
-6.18 -3.19 -6.14 -3.77 -2.24 -4.34 -3.14 1.92 -1.27 1.49 -0.16 -3.0 -3.35 -2.81 0.85 -2.12 -3.42 0.38 0.17 -3.01 -3.24 -2.75 1.07 -2.51 -3.98 0.79 -0.55 -0.72 -4.44 -1.92 0.74 -2.79 -2.75 -1.26 -0.86 -1.69 0.28 -1.92 1.51 -1.64 0.43 -4.54 -3.57 -2.47 -2.2 0.84 -1.71 -0.28 -2.95 -2.28 -3.14 -0.09 1.14 -2.76 0.96 -3.45 -3.02 1.92 0.71 0.5 0.87 -3.01 2.71 1.59 0.06 -3.49 0.88 0.94 0.06 -0.38 1.09 -1.96 -3.35 3.1 0.02 -0.88 0.98 -1.73
-0.15 -1.83 -0.33 0.38 1.14 -1.55 0.49 1.85 -0.28 -2.0 -1.43 -1.19 -1.1 -3.38 -0.82 -0.67 -1.78 -2.31 -1.07 -1.55 -2.03 -2.03 -0.09 -1.41 -1.71 -1.97 -2.06 -0.69 -1.84 -1.29 -0.27 -1.31 -0.63 0.6 0.43 0.7 0.34 -0.13 2.24 -0.06 -0.33 -1.67 0.64 -0.09 -1.29 -0.81 -1.14 0.53 -0.01 -1.29 0.3 0.65 0.38 -0.97 -0.13 -0.62 -2.87 -0.71 0.37 0.43 1.28 -0.06 2.36 -1.06 -0.9 -0.58 0.8 1.04 -0.72 0.09 1.4 -0.29 -2.12 0.93 -0.47 -0.84 1.28 0.7
-3.08 2.28 -2.91 -1.8 0.91 -0.06 0.47 1.71 0.41 -2.55 -1.81 -1.67 -4.07 -3.16 -1.46 -1.49 -3.28 -3.89 -2.78 -1.83 -2.35 -3.07 -0.6 -2.97 -1.32 -2.73 -3.28 -1.5 -1.38 -1.67 -1.48 -2.09 -1.2 0.45 0.74 0.74 0.58 0.16 2.02 0.21 -0.15 -0.16 0.52 -0.26 -1.75 -0.69 -0.36 0.13 -0.09 -2.18 0.14 0.98 1.24 -1.44 -0.0 -1.12 -1.83 -0.41 0.75 0.3 1.12 -0.03 2.39 -1.09 -0.78 -0.65 0.84 0.7 -0.59 -0.17 1.54 0.5 -1.65 0.69 -0.38 -0.68 0.93 0.43
-3.08 0.26 -3.26 -1.26 1.46 -0.29 -0.4 1.49 -0.05 -2.12 -2.02 -1.05 -2.44 -2.73 -1.74 -1.66 -1.21 -3.21 -1.5 -1.37 -2.13 -2.65 -1.61 -1.23 -1.52 -2.13 -3.04 -1.64 -1.86 -2.54 -1.65 -1.35 -0.73 0.64 0.56 0.05 0.03 0.42 0.99 0.43 -0.12 -0.55 -0.6 -0.06 0.36 -0.57 1.65 0.75 -0.34 0.62 -0.45 -0.61 -0.9 -1.16 0.39 -0.7 -1.38 1.11 0.6 0.24 1.52 1.34 2.27 1.15 -0.5 -0.42 0.67 0.56 -0.68 1.11 0.08 0.42 -0.22 0.9 -0.27 -0.05 0.52 0.31
- - -5.7 -3.95 1.84 -1.58 0.52 1.92 -0.73 0.33 -1.38 -4.79 - -1.22 -1.96 -2.13 -1.02 -3.4 -4.54 -4.9 -2.58 -0.47 -0.29 -4.0 - -2.0 -1.95 -1.35 -2.98 -0.25 -0.99 -2.17 - 0.66 0.46 0.81 1.75 -3.7 2.66 -3.01 0.69 -2.0 0.62 -0.63 -0.3 0.69 0.13 -2.92 -2.7 -2.46 -3.9 -2.26 -2.49 -1.84 -1.79 -0.23 -2.07 -0.17 0.45 0.16 -0.67 0.48 3.08 -5.35 0.28 0.37 1.4 1.45 0.17 -0.04 1.69 -2.95 -0.28 1.43 0.22 0.15 1.41 -2.74
-5.63 -1.83 -6.48 -3.42 -1.24 -0.91 1.5 -2.44 2.32 -1.39 -2.91 -3.92 -2.37 -4.69 -0.9 -1.75 -2.52 -1.08 -2.16 -1.57 -1.65 -2.63 -1.55 -2.02 -2.46 -0.73 -1.34 -1.77 -3.36 -2.6 -2.54 -3.03 -2.41 -3.3 -3.14 -2.66 0.3 -5.4 2.14 -4.57 0.14 -1.73 0.29 2.25 0.04 1.58 -0.19 -4.4 -2.61 -1.94 -0.95 -0.85 -0.49 -3.3 -0.63 -0.45 -1.81 -2.89 -0.16 -0.43 -0.37 -0.75 -2.13 -3.32 2.02 0.49 -0.02 -0.67 1.47 -1.67 1.78 -4.65 1.11 0.75 2.24 2.19 3.29 -3.11
- -0.95 - -1.66 0.14 -0.57 0.86 0.73 0.71 -1.01 -2.54 -3.27 -3.11 -1.6 -0.84 -1.62 -1.74 -2.37 -1.81 -2.84 -3.21 -1.71 -1.45 -2.41 -3.19 -1.29 -1.14 -1.36 -2.93 -1.12 -0.51 -2.19 -1.61 0.98 1.11 0.44 0.6 -0.03 1.48 0.07 0.57 -0.97 -0.06 0.31 0.49 -0.06 1.88 1.97 0.91 -0.82 0.04 1.01 0.54 -1.85 0.43 -0.82 -0.64 1.02 -0.36 -0.64 0.33 -0.01 1.41 -0.9 0.15 -0.37 -0.06 -0.18 0.01 0.41 1.07 0.01 0.16 1.09 0.34 0.26 1.18 0.39
- -0.84 -6.1 -1.06 -0.07 0.33 -0.75 0.37 -0.28 0.92 -0.21 -1.85 -1.56 -0.78 0.3 -0.82 -0.74 -0.85 -0.8 -1.38 -0.55 -0.7 -0.01 -1.35 -1.0 1.27 0.34 -0.38 -0.7 -0.84 -0.33 -1.84 -0.72 0.93 0.89 0.52 0.26 0.49 0.85 0.84 0.96 0.26 -0.89 -0.43 -0.95 -1.27 -0.52 1.4 0.79 -2.78 0.87 0.13 -0.46 -2.27 -0.18 -0.49 -0.16 0.53 -0.19 -0.2 -0.29 0.5 1.26 1.12 -0.97 -0.28 -0.16 -0.37 -1.13 -0.34 0.61 0.45 -0.03 1.08 -0.84 -0.62 1.11 0.83
2.35 3.19 2.24 0.95 -0.2 - - - 1.66 - - - - 0.49 - -0.56 - - - -0.2 - -0.48 - - - - -0.28 -0.59 - - - - 0.75 1.0 - -1.07 -0.61 -2.97 -1.72 -0.49 -1.13 -0.73 - 0.39 -0.71 1.1 - - - - 3.5 1.79 2.88 -0.33 - -1.92 - -2.1 - -2.23 - - 0.01 -2.3 1.4 - -2.21 - 1.09 -1.67 -0.95 -1.9 -2.35 0.07 0.87 1.3 -1.61 -
-3.1 0.33 -3.44 -3.14 0.74 -2.07 -0.63 0.8 1.03 -2.37 -4.0 -5.01 -5.42 -3.35 -2.71 -3.86 -5.06 -3.09 -3.24 -4.35 -5.03 -3.18 -2.78 -4.35 -6.6 -2.23 -2.89 -2.97 -5.45 -2.8 -2.63 -4.72 -4.99 0.48 0.53 0.36 1.34 0.22 0.98 0.4 0.88 -2.79 -0.92 1.16 0.41 0.22 -0.16 1.75 2.3 -0.03 -0.0 0.71 -0.57 0.73 1.2 -0.89 0.34 1.86 -0.76 -0.73 0.05 -0.94 2.48 1.03 0.07 -0.57 -0.2 -0.02 0.21 0.47 0.91 0.19 -0.08 0.5 0.14 -0.3 0.7 0.39
-0.74 1.07 -1.04 -1.1 0.64 0.2 -0.23 1.47 -0.93 -0.33 -0.9 -2.69 -3.38 -1.75 -0.96 -1.19 -3.96 -1.88 -1.89 -2.56 -2.79 -2.23 -1.64 -3.27 -3.83 -1.02 -1.51 -1.76 -2.26 -2.58 -1.23 -2.84 -3.09 0.84 1.18 1.27 1.57 -1.21 0.97 -1.46 1.24 0.21 -1.02 -1.06 -1.03 -0.02 2.66 1.25 0.66 -2.48 -5.49 -2.7 -3.66 -6.3 0.2 -1.28 -3.15 0.72 0.19 0.0 1.11 -0.47 2.93 -2.44 -0.39 -0.41 -0.18 -0.64 -0.47 -0.33 0.93 -1.16 -0.71 1.46 0.17 -0.39 1.71 -1.28
-1.67 0.63 -1.92 -1.1 -0.01 0.14 -0.4 0.98 -0.41 -1.17 -2.17 -2.28 - -2.48 -1.31 -1.63 -2.08 -3.63 -1.46 -2.12 -3.41 -2.9 -1.63 -1.99 -3.34 -2.18 -2.2 -1.86 -3.82 -2.73 -1.35 -2.1 -2.71 0.9 1.3 1.69 1.66 -1.03 1.05 -1.74 1.23 -0.14 -0.82 -1.12 -0.48 0.59 2.51 1.76 1.1 -1.69 -4.74 -2.67 -3.88 -6.86 0.27 -0.28 -3.48 0.72 0.78 0.73 0.53 -0.88 2.28 -2.28 0.37 0.29 0.29 0.01 -0.03 -0.52 1.16 -1.01 -0.78 1.37 0.76 0.19 1.59 -1.53
-3.77 -5.14 -3.87 -5.4 -5.89 -4.82 -7.29 0.91 -1.2 0.77 1.17 -1.37 -5.28 -2.42 0.89 0.33 -4.74 2.37 2.3 0.62 -2.51 -2.72 -0.56 -0.22 -6.11 1.21 2.32 1.86 -6.12 -3.65 -2.45 -2.3 -3.83 -5.86 -6.55 -6.29 1.1 -6.42 1.24 -7.14 1.23 -5.42 -6.93 -1.46 -5.53 -0.21 -5.69 -3.97 -5.52 0.6 -5.71 -2.08 1.18 -7.57 1.72 -6.15 -7.08 -5.61 2.17 1.8 1.18 -4.79 1.47 -0.07 0.33 -5.91 0.43 0.2 0.61 -2.01 1.79 -7.16 -6.85 -0.58 0.85 -6.23 0.62 -6.65
0.66 -1.05 0.79 1.81 0.87 -2.12 -0.22 -0.68 0.93 0.27 0.46 -1.49 -1.62 -1.37 -0.07 -0.59 -0.93 1.36 0.38 -1.22 -1.07 -1.51 -0.33 -0.78 -1.03 0.19 0.1 -0.16 -1.21 -1.32 -0.86 -1.56 -0.87 -1.05 -1.25 -1.01 1.88 -1.08 1.36 -1.07 0.25 -2.08 -0.4 0.49 -0.34 1.0 -0.09 -1.87 -1.29 -1.54 -0.48 0.48 0.6 -1.82 -0.52 -1.34 -2.77 -1.18 0.33 0.11 0.49 -1.44 -0.38 0.05 0.65 -0.77 0.66 0.55 0.8 -0.57 1.35 -1.16 -1.42 -0.23 0.66 0.86 1.52 -0.84
-1.33 -3.11 -1.44 -0.63 0.68 -3.8 -0.57 -0.39 0.0 1.29 -0.3 -3.07 -2.81 -2.37 0.39 -2.11 -2.51 0.49 -0.61 -2.66 -2.39 -2.47 -0.5 -2.5 -3.46 1.34 -0.17 -1.01 -4.02 -2.38 -1.56 -3.14 -2.73 -1.68 -2.47 -2.24 2.09 -0.81 2.07 -0.55 1.29 -5.01 -0.6 -0.52 0.79 0.71 0.44 -2.59 -2.59 -0.96 -1.01 1.02 1.26 -0.24 1.46 -1.63 -4.3 -1.34 0.37 0.14 1.75 -2.12 0.07 -0.28 0.85 -1.01 0.23 -0.23 1.04 -0.57 2.16 -0.83 -1.94 0.21 0.66 0.8 2.06 -0.61
-4.93 -1.3 -5.09 -2.14 1.28 -0.34 -0.13 1.92 -0.16 -2.45 -2.57 -2.32 -2.74 -2.17 -2.27 -2.22 -2.37 -3.08 -2.28 -1.75 -2.36 -2.36 -1.87 -2.23 -2.85 -2.58 -3.06 -2.28 -2.9 -2.02 -1.71 -2.53 -1.84 0.83 0.83 0.53 -0.53 0.42 -0.13 0.1 -0.29 -0.52 -0.38 -0.26 0.02 -1.23 2.19 1.02 0.15 -2.54 -0.22 0.23 0.29 -1.71 1.36 -0.19 0.12 1.27 0.38 0.27 1.77 1.82 2.89 -1.63 -0.75 -0.17 0.41 0.28 -0.56 1.14 -0.51 0.41 -0.23 0.6 -0.63 -0.61 -0.11 0.08
1.25 2.96 1.28 1.79 0.95 -2.14 -3.15 -1.15 -0.82 -2.48 -1.24 0.72 -0.14 -1.18 -1.4 0.46 0.64 -2.51 -1.43 0.08 -0.25 -1.63 -1.35 0.41 0.16 -3.63 -2.3 -0.71 -0.14 -1.29 -0.98 0.3 0.22 -1.22 -0.54 0.74 2.74 -2.89 -1.84 -2.37 0.28 -3.37 -5.34 -0.99 0.38 0.54 0.28 -1.0 1.75 -1.91 -3.65 -5.89 -6.64 -2.67 -2.77 -0.82 -2.61 -0.45 -0.47 -1.02 1.0 0.82 -0.3 -3.13 0.2 -0.06 -0.02 -0.47 0.66 -0.22 0.16 -2.64 -0.85 -1.21 0.49 1.38 -0.88 -2.7
-3.41 -4.97 -4.04 -4.2 0.21 -4.4 -0.11 0.77 -0.45 1.12 0.32 -1.0 -3.29 -2.24 0.3 0.21 -2.89 -0.16 -0.72 -1.68 -1.31 -2.17 0.04 -0.53 -2.82 0.85 0.8 1.3 -2.25 -2.58 -0.71 -0.79 -2.34 -0.17 -0.41 -0.15 1.53 -1.8 2.25 -1.17 1.36 -3.32 -0.49 -0.38 -0.36 0.77 -1.83 -1.84 0.57 -2.16 -4.57 -1.96 -0.97 -5.95 -0.5 -1.98 -3.38 1.29 0.09 -0.23 -0.28 -1.82 2.62 0.83 0.12 -0.92 -0.29 -0.13 0.22 -1.23 1.87 -1.85 -0.93 2.0 0.32 -1.44 1.89 -0.73
-0.57 -1.48 -0.25 -0.32 1.02 0.21 0.72 0.9 -0.02 -1.43 -1.42 -1.6 -1.19 -1.82 -1.11 -0.11 -0.4 -2.22 -1.46 -2.2 -1.13 -1.57 -0.98 -1.04 -1.27 -2.64 -2.59 -0.59 -1.01 -1.31 -0.55 -1.68 -0.24 0.12 0.12 -0.7 0.86 -0.08 0.74 0.29 0.47 0.11 0.46 -0.41 -0.01 -0.17 0.63 0.64 0.34 -1.2 0.97 1.35 0.3 -1.3 0.37 0.76 -0.54 0.76 -0.1 -0.14 1.02 0.21 1.26 -0.89 0.02 1.18 0.02 -0.09 -0.4 0.32 0.77 -0.16 0.73 0.83 -0.05 0.21 0.16 0.32
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.