Heatmap: Cluster_45 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
ATCC 44394, early decay stage, 0-5 mm
ATCC 44394, middle late decay stage, 15-20 mm
ATCC 44394, late decay stage, 30-35 mm
SB12
MAD698-R, early decay stage, 0-5 mm
MAD698-R, middle late decay stage, 15-20 mm
MAD698-R, late decay stage, 30-35 mm
MAD698-R
Pure culture
week 6, furfural alcohol (FA10) treated wood
week 6, furfural alcohol (FA40) treated wood
week 6, furfural alcohol (FA70) treated wood
week 9, furfural alcohol (FA40) treated wood
week 3, untreated wood
week 4, untreated wood
week 3, furfural alcohol (FA10) treated wood
week 3, furfural alcohol (FA40) treated wood
week 3, furfural alcohol (FA70) treated wood
week 9, furfural alcohol (FA10) treated wood
week 9, furfural alcohol (FA70) treated wood
week 12, furfural alcohol (FA40) treated wood
week 12, furfural alcohol (FA70) treated wood
week 15, furfural alcohol (FA40) treated wood
week 15, furfural alcohol (FA70) treated wood
week 18, furfural alcohol (FA40) treated wood
week 18, furfural alcohol (FA70) treated wood
week 1, untreated wood
week 2, untreated wood
week 5, untreated wood
1.52 1.67 1.4 2.97 1.58 1.67 1.4 0.74 -6.55 -3.31 - -4.59 -5.42 -3.9 -3.84 -3.15 - -6.51 -2.13 -6.96 -3.5 -6.21 -0.83 - -2.13 -2.09 -3.77 - -3.22
2.04 2.21 2.13 - 2.18 2.21 2.13 1.16 - - - - - - - - - - - - - - - - - - - -3.07 -
2.21 1.87 2.31 - 2.19 1.87 2.31 1.22 - - -3.66 - - - - - - - - - -3.97 - - - - - - - -3.5
1.91 2.36 2.18 - 1.96 2.36 2.18 0.99 - -5.33 - - -7.19 - - - - - - - - - - - - - - - -
2.02 1.84 1.62 1.51 2.11 1.84 1.62 1.46 -0.45 -4.74 -4.47 -2.54 -3.88 -3.46 -3.6 -4.67 -3.48 -3.91 -6.45 -4.74 - -2.45 - - -6.42 -3.92 - - -
1.73 0.77 0.69 3.4 1.63 0.77 0.69 0.28 -1.73 -2.69 -2.23 -2.22 -2.64 -2.88 -2.81 -3.37 -5.21 -1.48 -3.44 -1.54 -3.07 -2.75 -2.26 -2.84 -1.61 -1.94 -1.36 -2.94 -2.15
1.8 1.41 1.04 3.02 2.0 1.41 1.04 0.7 -1.77 -5.11 -7.45 -2.76 -3.21 -7.11 -3.47 -6.5 -6.84 -2.97 -2.21 -5.11 -1.65 -3.69 - -5.36 -2.81 -1.3 -3.43 -3.31 -2.93
1.49 1.83 1.04 3.07 1.36 1.83 1.04 1.66 -0.8 - - - -2.03 - - - - - - - - - - - - - - - -
2.18 1.25 0.98 2.95 2.51 1.25 0.98 1.23 - - - - - - - - - - - - - - - - - - - - -
1.54 1.7 2.4 2.1 1.55 1.7 2.4 0.85 - - - - - - - - - - - - - - - - - - - - -
2.36 0.68 -0.42 3.25 2.52 0.68 -0.42 -0.42 -3.88 -3.29 -2.26 -3.04 -3.82 -2.38 -3.75 -3.75 -2.95 -0.72 -2.9 -2.04 -4.15 -3.77 -4.31 -3.54 -3.6 -3.27 -1.23 -2.54 -3.49
1.94 2.13 1.62 2.36 1.98 2.13 1.62 0.21 - - - - - - - - - - - - - - - - - - - - -
2.13 1.58 1.32 2.03 2.58 1.58 1.32 0.88 -0.18 -3.75 - - -4.06 -1.72 -5.14 -4.33 - - - - - - - - - -2.84 -2.29 - -
0.95 1.04 0.78 2.96 0.89 1.04 0.78 0.41 -2.64 -1.87 -1.86 -1.19 -1.28 -1.47 -2.0 -1.19 -0.47 -0.69 -2.15 -0.59 -2.22 -1.6 -1.45 -1.46 -1.61 -0.8 -0.11 -2.34 -1.32
2.14 1.32 1.36 2.99 2.19 1.32 1.36 0.8 - - -6.67 -7.21 -6.78 -6.43 -7.35 -5.03 -8.13 - -6.69 -9.78 -6.96 - - -7.64 -6.88 -7.03 -3.85 -7.52 -7.95
2.02 0.79 0.81 3.25 2.25 0.79 0.81 1.66 -6.16 - - - - - -4.68 - -1.31 - -6.33 -5.63 -6.03 - - - - - - - -
2.59 1.29 1.15 2.72 2.41 1.29 1.15 0.51 -4.63 -4.6 - -6.72 - - - -6.02 - - - -5.26 -6.08 - - -6.59 - - -2.55 - -7.1
1.61 1.79 2.14 1.19 1.53 1.79 2.14 1.77 -1.08 -4.66 - -4.95 -4.48 -3.21 -4.45 - - -3.85 -4.83 -3.63 -6.22 - -3.43 - -4.33 -2.27 - -1.84 -3.74
1.78 0.69 1.45 3.31 1.52 0.69 1.45 1.8 -4.34 - - - -3.51 - - - - - - -2.64 - - - - -1.84 - - - -
2.02 1.33 1.2 2.87 1.94 1.33 1.2 1.72 -2.48 -4.03 - -4.15 -4.58 -3.5 -6.12 -3.72 -3.87 - -4.08 -5.65 -6.53 - - -4.89 -3.56 -3.97 - - -4.29
2.24 1.18 1.95 2.67 2.15 1.18 1.95 0.23 - -7.19 - - - - - -8.11 - -8.33 - - -9.16 - -8.79 -8.76 -8.69 - - - -9.13
0.83 1.02 1.11 2.72 0.81 1.02 1.11 -0.16 -2.96 -1.59 -0.85 -1.78 -1.3 -0.65 -1.65 -0.58 -0.22 -0.87 -2.87 -1.23 -1.53 -1.23 -0.96 -1.33 -0.92 -0.88 -0.46 -1.29 -1.33
1.74 1.73 1.18 2.06 1.79 1.73 1.18 0.23 -2.83 -1.67 -2.14 -1.73 -1.47 -1.47 -2.23 -1.84 -1.69 -0.55 -4.05 -2.45 -3.19 -3.63 -2.81 -2.15 -2.23 -2.52 -0.2 -2.14 -2.09
2.23 1.75 1.06 2.76 1.99 1.75 1.06 1.08 - -4.93 - - - - -4.25 - - - - -1.15 - - - - - - - - -
1.52 1.75 1.39 2.03 1.61 1.75 1.39 -0.65 -3.01 -2.49 -1.58 -1.17 -2.12 -1.65 -2.35 -1.9 -2.53 -0.65 -2.97 -1.17 -2.17 -1.64 -2.34 -1.46 -2.15 -1.15 -0.55 -1.95 -2.43
1.43 1.22 1.19 2.62 1.51 1.22 1.19 0.24 -1.55 -2.29 -1.44 -1.9 -1.87 -1.37 -1.68 -2.11 -3.49 -1.36 -2.63 -1.6 -1.46 -1.58 -1.13 -1.35 -1.4 -1.71 -0.95 -0.89 -1.91
1.17 0.81 0.8 3.15 1.33 0.81 0.8 -0.23 -2.92 -4.21 -2.7 -0.53 -2.1 -2.11 -2.07 -1.52 -2.62 -1.22 -2.44 -1.57 -1.07 -0.93 -1.37 -1.34 -1.38 -0.65 0.22 -2.7 -2.37
2.38 -1.98 -1.39 3.45 2.51 -1.98 -1.39 1.68 -3.98 - -1.87 -1.72 -5.76 -3.81 -3.28 -2.58 -2.38 -4.44 -1.49 -2.44 -3.01 -2.66 -3.78 -2.06 -3.73 -3.74 -3.95 -6.68 -3.52
2.35 1.44 -0.17 2.75 2.59 1.44 -0.17 1.98 - - - - - - - - - - - - - - - - - - - - -
1.97 2.48 1.96 - 2.26 2.48 1.96 0.46 - - - - - - - - - - - - - - - - - - - - -
1.53 1.68 2.07 1.28 1.57 1.68 2.07 1.97 -1.96 -5.91 - - -3.18 - -3.1 -3.79 - -0.7 - -1.93 - - -3.18 -3.75 -3.95 - - -2.95 -2.34
1.85 1.32 1.17 2.26 1.88 1.32 1.17 0.77 -1.6 -3.33 -1.84 -1.72 -2.22 -1.52 -1.96 -2.46 -1.59 -1.61 -3.14 -1.38 -1.99 -1.4 -2.41 -1.79 -2.26 -2.26 -0.77 -2.28 -2.12
1.69 1.0 0.75 3.03 1.69 1.0 0.75 0.91 -2.77 -2.57 -2.05 -1.49 -2.02 -1.46 -1.92 -1.71 -2.44 -1.97 -2.95 -2.0 -2.59 -1.5 -2.81 -1.94 -1.99 -2.13 -1.4 -1.94 -2.35
1.91 -0.09 -0.51 2.81 2.33 -0.09 -0.51 1.0 0.07 -3.55 -1.3 -1.68 -2.12 -1.2 -1.33 -1.8 -3.45 -1.31 -2.5 -1.82 -0.6 -2.35 -2.18 -0.41 -0.79 -2.83 -0.02 -4.32 -2.35
1.7 1.0 0.45 2.06 1.78 1.0 0.45 0.31 -1.59 -1.12 -1.04 -1.47 -1.3 -0.48 -1.08 -0.74 -0.86 -0.74 -1.77 -1.6 -1.26 -1.08 -1.5 -1.02 -1.22 -1.29 -0.04 -0.62 -1.41
1.15 1.32 1.14 3.72 0.93 1.32 1.14 1.2 - - - - - - - - - - - - - - - - - - - - -
1.4 1.23 1.04 2.5 1.33 1.23 1.04 -0.41 -3.14 -1.87 -1.35 -2.0 -1.06 -1.05 -1.9 -1.4 -0.51 -1.17 -1.96 -1.31 -1.39 -1.54 -1.74 -1.57 -0.86 -1.74 0.11 -1.73 -0.8
1.83 1.52 1.44 2.69 1.87 1.52 1.44 1.43 -2.64 - - - - -3.67 - -1.38 - - - -4.3 - - -2.79 - - - - -0.56 -
1.85 1.05 1.44 3.42 1.74 1.05 1.44 0.69 -6.45 - - - - - - - - - - -6.3 - - -6.3 - -3.25 - - - -
2.15 1.9 2.06 0.87 2.22 1.9 2.06 1.15 -6.92 - - -9.91 - - - -5.64 - - - - - -7.79 -8.5 -7.44 - - - - -
1.22 0.93 0.96 2.8 1.2 0.93 0.96 0.3 -1.4 -2.41 -0.93 -1.28 -1.56 -1.38 -1.82 -1.36 0.1 -0.79 -3.65 -1.12 -2.11 -1.01 -2.85 -1.39 -1.46 -2.02 -0.14 -1.36 -2.05
1.52 1.51 1.12 2.89 1.75 1.51 1.12 -0.37 -3.52 -2.58 -3.12 -1.17 -2.37 -2.51 -1.68 -1.63 -4.9 -3.81 -1.62 -1.76 -3.16 -3.97 -1.0 -1.43 -2.19 -3.49 -2.14 -2.79 -1.86
1.65 1.11 1.21 3.6 1.8 1.11 1.21 0.21 - - - - - - - - - - - - - - - - - - - - -3.14
1.55 2.49 2.29 - 1.72 2.49 2.29 0.62 -3.84 - -5.63 - - -5.3 - - - - -5.6 -5.32 - - - - - - - - -5.19
2.09 1.84 1.76 1.79 2.14 1.84 1.76 1.36 -6.65 - - - -4.55 -4.39 - -6.08 -2.52 -6.71 - -5.59 -4.51 -6.76 - -5.79 - - - -7.35 -6.18
1.66 1.4 1.7 2.15 2.08 1.4 1.7 1.63 0.4 -4.95 -3.3 -2.48 -3.44 -2.55 -4.44 - - - - -1.7 - - - - - - - - -4.44
2.49 1.2 1.47 2.2 2.66 1.2 1.47 1.2 - - - -4.67 - - - - - - - - - - - - - - - - -
1.38 1.58 1.3 1.5 1.51 1.58 1.3 0.35 0.01 -2.0 -1.6 -1.06 -1.49 -1.21 -0.84 -1.6 -2.35 -1.51 -1.77 -1.34 -1.85 -2.03 -1.44 -1.04 -1.51 -1.32 -0.28 -1.72 -1.59
2.16 1.33 1.37 2.75 2.05 1.33 1.37 1.65 - -7.54 -6.23 -4.38 -5.92 -7.91 -5.59 -4.44 - - -6.85 -6.41 -6.17 - - -5.59 -4.06 -4.15 - - -7.71
2.41 2.06 1.79 - 2.48 2.06 1.79 0.56 - -3.87 - -1.8 -4.6 -4.37 -5.49 -3.63 -2.96 -5.88 -4.98 -4.07 -6.45 -3.16 -4.11 -4.02 -5.49 -4.91 -3.4 -2.6 -3.96
1.7 0.7 0.87 3.07 1.39 0.7 0.87 0.87 -1.81 -1.38 -0.84 -2.21 -1.26 -2.14 -1.67 -1.98 -3.79 -2.01 -1.33 -3.59 -1.54 -2.2 -2.4 -1.52 -1.15 -2.18 -2.42 -1.26 -2.67
1.55 2.28 2.0 1.17 1.85 2.28 2.0 0.85 - -3.87 -4.82 -4.18 -3.41 -2.38 - - - - - - - -3.33 -4.78 -4.52 -5.11 - - -4.63 -
1.63 1.35 1.46 2.05 1.79 1.35 1.46 -0.53 -2.76 -2.56 -2.23 -1.49 -1.61 -1.53 -2.27 -1.57 -1.2 -1.08 -2.06 -1.19 -2.19 -1.97 -2.1 -1.42 -1.21 -1.19 -0.71 -1.41 -1.46
2.22 1.1 1.18 3.01 2.04 1.1 1.18 1.76 - - - - - - - - - - -29.46 - - - - - -31.78 - - - -
1.09 1.16 1.12 2.84 0.96 1.16 1.12 -0.96 -1.28 -1.37 -0.88 -2.06 -1.04 -1.41 -1.13 -1.05 -1.33 -2.05 -0.87 -1.26 -1.32 -1.36 -1.68 -1.03 -1.43 -0.78 -1.79 -1.51 -1.77
2.0 -0.55 -0.23 3.45 2.23 -0.55 -0.23 2.02 - - -2.93 -2.5 -3.13 -2.27 -2.63 -2.46 - -3.82 -3.62 -4.13 -2.77 -4.32 - -2.1 -4.29 -1.67 -2.64 - -2.88
2.28 0.75 0.24 3.41 2.4 0.75 0.24 1.28 -16.49 - - - - - - - -4.21 - - -9.81 -7.17 -8.07 - - - - - - -8.35
1.86 2.31 1.83 1.34 1.8 2.31 1.83 1.19 - - - - - - - - - - - - - - - - - - - - -
1.98 -1.15 -1.33 3.37 2.0 -1.15 -1.33 1.01 -0.98 -1.92 -2.31 -2.1 -1.83 -1.36 -1.79 -1.44 -2.19 -1.74 -1.57 -2.03 -1.72 -1.7 -1.74 -1.91 -1.46 -2.25 0.09 -1.72 -1.78
2.56 0.03 -0.31 3.35 2.39 0.03 -0.31 0.63 -0.7 -1.85 - -5.13 -3.29 -3.26 -5.55 -2.77 -2.23 -6.25 -2.47 - -11.92 -5.3 -3.08 -4.66 -4.13 -3.21 -3.1 -2.87 -2.68
1.31 2.0 1.86 - 1.48 2.0 1.86 0.71 -5.1 -1.97 -1.37 -1.7 -1.73 -0.94 -1.61 -1.08 -1.47 -1.47 -2.3 -1.81 -1.81 -1.8 -1.68 -1.76 -2.28 -1.41 -1.13 -0.93 -1.76
1.95 1.62 1.08 3.33 1.95 1.62 1.08 -0.28 - - - - - - - - - - - - - - - - - - - - -
1.83 2.4 1.98 - 2.05 2.4 1.98 1.52 - - - - - - - - - - - - - - - - - - - - -
1.75 2.33 1.93 -0.06 1.76 2.33 1.93 0.83 - -6.4 -6.37 -5.08 -3.21 -3.62 -4.55 -5.1 -2.4 -1.26 -5.45 -2.36 -5.33 -2.2 - -4.2 -3.44 -3.28 -4.12 -2.9 -4.09
0.42 1.86 1.91 3.19 0.71 1.86 1.91 0.11 - - -7.88 -5.24 -5.88 -5.95 -7.82 -6.14 -0.21 -6.32 -7.89 -7.29 -6.85 -7.23 -5.74 -7.36 -6.54 - - - -7.9
1.54 0.55 0.2 3.45 2.09 0.55 0.2 1.91 -5.31 -2.99 -4.25 -3.04 -3.86 -5.1 -5.73 -3.4 -1.77 -4.65 -7.94 -1.63 -3.93 -3.47 -6.51 -2.54 -3.74 -2.55 -3.36 -5.44 -6.4
2.13 0.99 0.96 3.0 2.76 0.99 0.96 0.98 - - - - - - - - - - - - - - - - - - - - -
2.25 1.69 0.74 3.03 2.05 1.69 0.74 1.1 - - - - - - - - - - - - - - - - - - - - -
0.57 1.65 1.92 2.91 0.87 1.65 1.92 1.44 - - - -4.49 - - -5.1 -2.33 - -1.79 - - - -2.39 - -2.92 -1.12 -2.03 - - -4.31
1.94 2.0 2.13 1.62 1.77 2.0 2.13 0.96 - - - - - - - - - - - - - - - - - - - - -
1.38 1.87 1.18 3.53 1.38 1.87 1.18 -1.51 - - - - - - - - - - - - - - - - - - - - -
2.0 2.16 2.34 -2.0 2.02 2.16 2.34 -1.23 -1.92 -4.44 -7.05 -6.06 -5.05 -3.95 -5.44 -4.4 - -4.82 -3.71 -4.2 -4.46 -3.48 -6.36 -4.28 -2.99 -3.46 -4.76 -7.14 -5.29
2.15 -0.48 -0.76 3.25 2.45 -0.48 -0.76 0.78 -3.15 -2.67 -2.12 -2.15 -2.25 -2.73 -2.76 -2.17 -3.68 -1.31 -1.81 -2.31 -2.52 -2.52 -2.06 -2.2 -2.42 -2.02 0.38 -3.99 -2.48
2.7 -0.4 -0.42 3.08 2.86 -0.4 -0.42 1.02 0.84 - - - - - - - - - - - - - - - - - - - -
2.06 1.28 1.15 2.48 2.08 1.28 1.15 0.96 -2.34 -3.01 -3.48 -1.54 -2.32 -2.36 -2.86 -1.59 -2.41 -1.89 -4.21 -2.71 -3.17 -3.11 -2.62 -1.62 -3.32 -3.35 -2.41 -1.6 -3.78
1.19 2.13 0.22 3.4 1.6 2.13 0.22 1.06 - - - - - - - - - - - - - - - - - - - - -
1.75 1.66 1.36 1.12 1.84 1.66 1.36 0.06 -2.63 -1.36 -0.64 -1.2 -1.69 -1.77 -1.79 -1.88 -2.06 -1.22 -1.09 -1.89 -1.09 -1.47 -1.21 -1.07 -1.4 -1.57 -1.37 -2.27 -2.98
1.1 1.34 0.78 2.65 1.1 1.34 0.78 0.42 -2.61 -1.46 -1.32 -1.25 -1.29 -0.98 -1.56 -0.77 -1.58 -0.93 -1.86 -1.14 -1.16 -1.38 -1.09 -1.15 -1.99 -1.24 -0.76 -0.91 -1.87
1.24 1.27 1.33 2.4 1.2 1.27 1.33 0.77 -1.37 -1.5 -3.44 -1.18 -1.75 -1.77 -1.4 -1.59 -3.14 -1.17 -3.04 -1.29 -1.15 -1.1 -1.26 -1.44 -0.94 -0.95 -2.23 -0.73 -1.88
1.9 1.34 1.43 2.81 1.9 1.34 1.43 1.27 -4.88 -5.66 - - -5.03 -2.74 -5.24 -1.52 - - -5.45 -4.03 - -4.06 - -5.01 - - -0.52 - -2.67
2.18 1.48 1.27 1.79 2.24 1.48 1.27 1.55 -1.4 -2.21 -4.6 -1.77 -2.71 -3.13 -3.82 -2.95 -3.67 -1.0 -4.32 -2.9 -5.83 -3.53 -3.01 -2.64 -4.24 -5.08 -2.72 -4.21 -3.05
1.21 1.81 1.67 1.54 1.27 1.81 1.67 1.11 -2.09 -3.02 -2.11 -2.39 -1.83 -0.93 -1.99 -1.87 -2.43 -1.2 -2.11 -1.4 -1.98 -1.35 -2.38 -2.47 -2.34 -1.62 -1.91 -1.7 -1.54
1.97 1.72 1.87 - 2.04 1.72 1.87 1.08 -1.36 -2.59 -2.5 -1.95 -2.22 -2.13 -2.03 -1.57 -1.82 -2.47 -3.69 -2.4 -2.01 -1.95 -2.22 -1.95 -1.81 -2.11 -1.81 -1.95 -2.58
1.49 1.77 1.65 1.62 1.45 1.77 1.65 0.18 -2.67 -1.59 -2.64 -2.39 -2.69 -1.0 -1.36 -0.96 -1.96 -1.7 -2.7 -1.72 -3.23 -2.38 -2.3 -2.63 -2.81 -1.51 -0.1 -1.91 -1.58
1.39 0.88 1.26 3.75 1.42 0.88 1.26 0.82 - - - - - - - - - - - - - - - - - - - - -
1.64 1.71 1.09 1.14 1.44 1.71 1.09 0.07 -1.0 -1.44 -1.86 -1.07 -1.6 -1.01 -1.31 -0.91 -1.86 -1.12 -2.56 -1.19 -1.25 -1.25 -1.24 -0.27 -1.38 -1.06 -0.46 -1.22 -1.84
1.56 1.34 0.96 3.25 1.71 1.34 0.96 0.93 -4.58 -3.51 -3.56 -2.9 -3.66 -3.21 -3.3 -3.22 -2.51 -3.31 -4.7 -2.52 -3.51 -4.27 -3.72 -2.66 -3.43 -3.5 -1.03 -4.07 -3.39
0.87 0.95 1.1 3.74 0.76 0.95 1.1 1.31 -0.11 - - - -4.12 - -2.41 -4.07 - -4.37 - - - - -4.66 -3.99 - - - - -2.64
2.08 0.39 0.17 3.27 2.62 0.39 0.17 1.95 - - - - - - - - -3.71 -2.95 - - - - - - - - - - -3.44
0.88 0.68 0.48 2.75 0.93 0.68 0.48 1.0 -2.12 -1.64 -1.05 -1.04 -1.05 -0.67 -1.05 -0.66 -1.73 -0.91 -1.25 -0.9 -1.06 -1.35 -1.25 -0.74 -0.73 -1.19 -0.39 -0.51 -0.82
1.24 1.21 1.27 3.58 1.36 1.21 1.27 0.91 -5.2 -4.82 -5.63 -6.2 -3.11 -4.8 -4.47 -5.33 -7.73 -7.63 -3.13 -4.65 -6.64 -7.71 -4.66 -5.27 -4.53 -3.77 -4.25 -5.33 -4.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.