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Heatmap: Cluster_74 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
mycelia,2n,AaBb,28C 4wk,wood,CBS141873
mycelia,2n,AaBb,28C 2wk,wood,CBS141873
mycelia,1n,Ab,28C 4wk,wood,CBS463.89
mycelia,1n,Ab,28C 2wk,wood,CBS463.89
mycelia,1n,aB,28C 2wk,wood,CBS464.89
mycelia,1n,aB,28C 4wk,wood,CBS464.89
mycelia,2n,AaBb,28C 4wk,wood,FBCC312S
mycelia,2n,AaBb,28C 2wk,wood,FBCC312S
mycelia,2n,AaBb,28C 2wk,wood,FBCC312B
mycelia,2n,AaBb,28C 4wk,wood,FBCC312B
mycelia,2n,AaBb,28C 2wk,wood,OM18370
mycelia,2n,AaBb,28C 4wk,wood,OM18370
mycelia,1n,Ab,28C 2wk,wood,OM18370.1
mycelia,1n,Ab,28C 4wk,wood,OM18370.1
mycelia,2n,AaBb,28C 4wk,wood,CBS141874
mycelia,2n,AaBb,28C 2wk,wood,CBS141874
1n,aB,xylan+glc,CBS464.89
1n,aB,25mM raffin 5d,agar,CBS464.89
1n,aB,Avicel+glc,CBS464.89
1n,aB,Avicel,CBS464.89
1n,aB,1% arabingal 10d,agar,CBS464.89
1n,aB,1% pectic 5d,agar,CBS464.89
1n,aB,1% beet pectin 10d,agar,CBS464.89
1n,aB,1% arabinxyl 5d,agar,CBS464.89
1n,aB,1% E460 10d,agar,CBS464.89
1n,aB,1% xylogl 5d,agar,CBS464.89
1n,aB,1% pectic 10d,agar,CBS464.89
1n,aB,1% arabingal 5d,agar,CBS464.89
1n,aB,25mM Dglc 5d,agar,CBS464.89
1n,aB,1% inulin 10d,agar,CBS464.89
1n,aB,1% arabinxyl 10d,agar,CBS464.89
1n,aB,1% starch 5d,agar,CBS464.89
1n,aB,1% starch 10d,agar,CBS464.89
1n,aB,xylan,CBS464.89
1n,aB,1% xylogl 10d,agar,CBS464.89
1n,aB,1% beet pectin 5d,agar,CBS464.89
1n,aB,25mM sucro 5d,agar,CBS464.89
1n,aB,1% E460 5d,agar,CBS464.89
1n,aB,1% inulin 5d,agar,CBS464.89
1n,aB,25mM malt 5d,agar,CBS464.89
rice straw 30d,DSM9615
rice straw 25d,DSM9615
rice straw 20d,DSM9615
rice straw 15d,DSM9615
rice straw 10d,DSM9615
mycelia,1n,aB,S aromat,LN-AS,CBS464.89
mycelia,1n,aB,no aromat ctrl,LN-AS,CBS464.89
mycelia,1n,aB,birchwood,LN-AS,CBS464.89
mycelia,1n,aB,G aromat,LN-AS,CBS464.89
mycelia,2n,AaBb,ferulic,LN-AS,FBCC312S
mycelia,2n,AaBb,1% spruce,LN-AS,FBCC312S
mycelia,2n,AaBb,coniferyl,LN-AS,FBCC312S
mycelia,2n,AaBb,cinnamic,LN-AS,FBCC312S
mycelia,2n,AaBb,p-coumaric,LN-AS,FBCC312S
mycelia,2n,AaBb,PCA,LN-AS,FBCC312S
mycelia,2n,AaBb,PHBA,LN-AS,FBCC312S
mycelia,2n,AaBb,vanillyl alc,LN-AS,FBCC312S
mycelia,2n,AaBb,0.05% glyc ctrl,LN-AS,FBCC312S
mycelia,2n,AaBb,vanillin,LN-AS,FBCC312S
mycelia,2n,AaBb,vanillic,LN-AS,FBCC312S
mycelia,2n,AaBb,vanillyl alc, LN-AS,FBCC312S
mycelia,2n,AaBb,veratryl,LN-AS,FBCC312S
mycelia,2n,AaBb,25mM glc,LN-AS,FBCC312S
mycelia,2n,AaBb,0.5% DMSO,LN-AS,FBCC312S
mycelia,1n,aB,xyl,LN-AS,CBS464.89
2n,AaBb,25mM raffin 5d,agar,FBCC312
2n,AaBb,25mM sucro 5d,agar,FBCC312
2n,AaBb,1% starch 10d,agar,FBCC312
2n,AaBb,1% starch 5d,agar,FBCC312
2n,AaBb,1% E460 10d,agar,FBCC312
2n,AaBb,1% E460 5d,agar,FBCC312
2n,AaBb,1% arabingal 10d,agar,FBCC312
2n,AaBb,1% arabingal 5d,agar,FBCC312
2n,AaBb,1% inulin 5d,agar,FBCC312
2n,AaBb,1% pectic 5d,agar,FBCC312
2n,AaBb,1% xylogl 10d,agar,FBCC312
2n,AaBb,1% xylogl 5d,agar,FBCC312
2n,AaBb,25mM malt 5d,agar,FBCC312
2n,AaBb,25mM Dglc 5d,agar,FBCC312
2n,AaBb,1% beet pectin 5d,agar,FBCC312
2n,AaBb,1% pectic 10d,agar,FBCC312
2n,AaBb,1% beet pectin 10d,agar,FBCC312
2n,AaBb,1% arabinxyl 10d,agar,FBCC312
2n,AaBb,1% arabinxyl 5d,agar,FBCC312
xylan,pFu..Cre1-39
xylan+glc,pFu..Cre1-39
Avicel+glc,pFu..Cre1-39
Avicel,pFu..Cre1-39
Avicel+glc,pFu..Cre1-24
Avicel,pFu..Cre1-24
xylan,pFu..Cre1-24
xylan+glc,pFu..Cre1-24
1n,Ab,CBS463.89
1n,Ab,OM18370.1
1n,aB,CBS464.89
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 6.57 - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - 2.78 - - - - - - - - - - - - - - - - 5.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.64 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.33 - - - - - - - - - - - - - - - - 5.75 - - - - - - - - - 4.41 - - - - - - - - - - - - - -
- - - - - - - - 2.81 - - 3.61 - - - - - - - - - - - - - - - - - - - - - - 4.53 - 4.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.18 - - - - - - - - - - - - - - - 3.43 - - - - - - - - - - - - - -
- - - - - 0.77 - - 0.19 - - - 0.89 - - - -0.66 2.18 - -0.52 2.45 - - - 1.54 - - - 1.16 - - - - -0.67 - - - - - 1.85 - 3.11 2.88 - - -0.55 -0.23 - -0.12 - 0.85 0.87 - - 1.74 - - - - 0.77 - - - 0.74 - - - 1.65 - - 2.14 0.7 2.46 - 1.02 - 0.88 1.9 - 1.08 0.81 1.73 - - 2.08 - - - - - 1.46 2.14 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.