YDL060W


Description : Protein required for processing of 20S pre-rRNA in the cytoplasm; associates with pre-40S ribosomal particles; inhibits the premature association of 60S subunits with assembling 40S subunits in the cytoplasm; similar to Bms1p; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000002218]


Gene families : OG_03_0003814 (OF) Phylogenetic Tree(s): OG0003814_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YDL060W
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR95500 No alias pre-rRNA-processing protein TSR1;AARP2CN (NUC121)... 0.33 OF
AOA65720 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal 0.28 OF
CAG82895 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal 0.39 OF
CAK96376 No alias AARP2CN (NUC121) domain 0.32 OF
CBF69821 No alias pre-rRNA processing protein Tsr1, putative 0.2 OF
EAA27716 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal 0.33 OF
EAL93581 No alias pre-rRNA processing protein Tsr1, putative 0.3 OF
EAU91047 No alias ribosome biogenesis protein tsr1 0.02 OF
EDO02623 No alias AARP2CN 0.21 OF
EGR47127 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal 0.23 OF
ESU08703 No alias AARP2CN 0.32 OF
KHC70707 No alias pre-rRNA-processing protein TSR1;40S ribosome biogenesis... 0.3 OF
MGG_01087T0 No alias Ribosome biogenesis protein TSR1... 0.15 OF
SPAC23H4.15.1 No alias ribosome biogenesis protein Tsr1 (predicted)... 0.32 OF

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007034 BMS1_TSR1_C 486 779
IPR012948 AARP2CN 235 311
No external refs found!