EJF57331

Description : RNA polymerase Rpb3/RpoA insert domain

Gene families : OG_03_0002740 (OF) Phylogenetic Tree(s): OG0002740_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EJF57331
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AFR94965	No alias	DNA-directed RNA polymerase I and III subunit RPAC1;RNA...	0.12	OF
AOA70237	No alias	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	0.04	OF
CAG79929	No alias	DNA-directed RNA polymerase, insert domain	0.04	OF
CAK47675	No alias	RNA polymerase Rpb3/Rpb11 dimerisation domain	0.1	OF
CBF86802	No alias	DNA-directed RNA polymerase I and III subunit Rpc40, putative	0.07	OF
EAA36428	No alias	DNA-directed RNA polymerase, insert domain	0.11	OF
EAL93667	No alias	DNA-directed RNA polymerase I and III subunit Rpc40, putative	0.05	OF
EDO00099	No alias	DNA-directed RNA polymerase, insert domain	0.08	OF
EGR50760	No alias	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	0.12	OF
KHC81579	No alias	DNA-directed RNA polymerase I and III subunit RPAC1;RNA...	0.05	OF
MGG_09284T0	No alias	DNA-directed RNA polymerase I and III subunit RPAC1...	0.04	OF
POW14778	No alias	DNA-directed RNA polymerase, insert domain;DNA-directed...	0.04	OF
SPBC1289.07c.1	No alias	DNA-directed RNA polymerase I and III subunit Rpc40...	0.05	OF
YPR110C	No alias	RNA polymerase subunit AC40; common to RNA polymerase I...	0.05	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011263	DNA-dir_RNA_pol_RpoA/D/Rpb3	68	332
IPR011262	DNA-dir_RNA_pol_insert	100	225

External Links

No external refs found!

EJF57331

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation