AFR97232

Description : DNA-directed RNA polymerase III subunit RPC2;RNA polymerase Rpb2, domain 7;RNA polymerase Rpb2, domain 2;RNA polymerase Rpb2, domain 5;RNA polymerase beta subunit;RNA polymerase Rpb2, domain 6;RNA polymerase Rpb2, domain 4;RNA polymerase Rpb2, domain 3

Gene families : OG_03_0002674 (OF) Phylogenetic Tree(s): OG0002674_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR97232
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AOA70175	No alias	RNA polymerase Rpb2, domain 2	0.07	OF
CAG83219	No alias	RNA polymerase Rpb2, domain 3	0.12	OF
CAK43742	No alias	RNA polymerase Rpb2, domain 3	0.02	OF
CBF89725	No alias	DNA-directed RNA polymerase III, beta subunit, putative	0.08	OF
EAA27959	No alias	RNA polymerase Rpb2, domain 4	0.06	OF
EAL87958	No alias	DNA-directed RNA polymerase III, beta subunit, putative	0.09	OF
EDO01279	No alias	RNA polymerase Rpb2, domain 3	0.05	OF
EGR48063	No alias	RNA polymerase Rpb2, domain 3	0.05	OF
ESU06078	No alias	DNA-directed RNA polymerase III	0.08	OF
KHC70428	No alias	DNA-directed RNA polymerase III subunit RPC2;"RNA...	0.16	OF
MGG_06984T0	No alias	DNA-directed RNA polymerase III subunit RPC2...	0.1	OF
POW07023	No alias	RNA polymerase Rpb2, domain 5;RNA polymerase, beta...	0.03	OF
SPAC4G9.08c.1	No alias	DNA-directed RNA polymerase III complex subunit Rpc2...	0.02	OF
YOR207C	No alias	Second-largest subunit of RNA polymerase III; RNA...	0.14	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007641	RNA_pol_Rpb2_7	1117	1201
IPR007642	RNA_pol_Rpb2_2	261	443
IPR007647	RNA_pol_Rpb2_5	704	744
IPR007644	RNA_pol_bsu_protrusion	113	478
IPR007120	DNA-dir_RNAP_su2_dom	751	1115
IPR007646	RNA_pol_Rpb2_4	622	683
IPR007645	RNA_pol_Rpb2_3	522	585

External Links

No external refs found!

AFR97232

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation