AFR96007

Description : pre-mRNA-splicing factor SPF27;Breast carcinoma amplified sequence 2 (BCAS2)

Gene families : OG_03_0004186 (OF) Phylogenetic Tree(s): OG0004186_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR96007
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AOA70340	No alias	Pre-mRNA-splicing factor SPF27	0.04	OF
EAU93441	No alias	Pre-mRNA-splicing factor SPF27	0.04	OF
ESU16551	No alias	Pre-mRNA-splicing factor SPF27	0.03	OF
SPBC28F2.04c.1	No alias	splicing factor Cwf7 [Source:PomBase;Acc:SPBC28F2.04c]	0.02	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008409	SPF27	6	204

External Links

No external refs found!