AFR92218

Description : pre-mRNA-processing factor 6;PRP1 splicing factor, N-terminal;Tetratricopeptide repeat-like domain

Gene families : OG_03_0001682 (OF) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AFR92218
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
CBF79397	No alias	mRNA splicing factor	0.02	OF
EAL87698	No alias	mRNA splicing factor (Prp1/Zer1), putative	0.04	OF
EDO02532	No alias	Tetratricopeptide repeat	0.03	OF
EGR45600	No alias	Tetratricopeptide repeat	0.03	OF
ESU16930	No alias	PRP1 splicing factor, N-terminal	0.03	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010491	PRP1_N	23	164
IPR018704	TPR_21	650	746

External Links

No external refs found!