KHC84072


Description : 5'-3' exoribonuclease 1;Xrn1 SH3-like domain;Exoribonuclease 1 Domain-3;Xrn1 helical domain;Exoribonuclease Xrn1 D1 domain;XRN 5'-3' exonuclease N-terminus;Exoribonuclease Xrn1 D2/D3 domain


Gene families : OG_03_0002980 (OF) Phylogenetic Tree(s): OG0002980_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KHC84072
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AFR95645 No alias 5'-3' exoribonuclease 1;Xrn1 SH3-like... 0.05 OF
AOA68846 No alias Exoribonuclease 1, domain 3 0.12 OF
CAG82487 No alias Putative 5-3 exonuclease 0.04 OF
CBF74062 No alias exonuclease II 0.02 OF
EAA31689 No alias Xrn1, D1 domain 0.06 OF
EAL85993 No alias exonuclease Kem1, putative 0.12 OF
EAU83256 No alias exonuclease II 0.02 OF
EED79836 No alias Putative 5-3 exonuclease 0.02 OF
MGG_12403T0 No alias 5'-3' exoribonuclease 1 [Source:UniProtKB/TrEMBL;Acc:G4MV17] 0.04 OF
POW08118 No alias Xrn1, helical domain;Putative 5-3 exonuclease 0.03 OF
POW13194 No alias 5'-3' exoribonuclease 1, SH3-like domain;Xrn1, helical... 0.03 OF
SPAC17A5.14.1 No alias exonuclease II Exo2 [Source:PomBase;Acc:SPAC17A5.14] 0.09 OF
YGL173C No alias Evolutionarily-conserved 5'-3' exonuclease; component of... 0.23 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041385 SH3_12 1168 1238
IPR040486 Xrn1_D3 1093 1162
IPR041412 Xrn1_helical 272 693
IPR040992 XRN1_D1 732 920
IPR004859 Put_53exo 1 226
IPR041106 XRN1_D2_D3 924 1012
No external refs found!