KHC78967

Description : pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2;Helicase associated domain (HA2);Oligonucleotide/oligosaccharide-binding (OB)-fold;DEAD/DEAH box helicase;Helicase conserved C-terminal domain

Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KHC78967
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AFR95524	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.02	OF
CAG82909	No alias	Helicase, C-terminal	0.03	OF
CAK44849	No alias	Helicase associated domain (HA2)	0.03	OF
CBF70766	No alias	mRNA splicing factor RNA helicase	0.03	OF
EAA31559	No alias	Helicase-associated domain	0.02	OF
EAA33344	No alias	Helicase-associated domain	0.03	OF
EAL90253	No alias	ATP dependent RNA helicase, putative	0.02	OF
EAL91525	No alias	RNA helicase-like splicing factor (HRH1), putative	0.03	OF
EAL93068	No alias	mRNA splicing factor RNA helicase (Cdc28), putative	0.06	OF
EAU93276	No alias	pre-mRNA splicing factor	0.02	OF
EGR50716	No alias	Helicase, C-terminal	0.04	OF
ESU06871	No alias	Domain of unknown function DUF1605	0.02	OF
MGG_08807T0	No alias	Pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.02	OF
SPBC19C2.01.1	No alias	ATP-dependent RNA helicase Cdc28 [Source:PomBase;Acc:SPBC19C2.01]	0.02	OF
YKR086W	No alias	DEAH-box RNA helicase involved in second catalytic step...	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	626	701
IPR011709	DUF1605	783	857
IPR011545	DEAD/DEAH_box_helicase_dom	235	392
IPR001650	Helicase_C	442	564

External Links

No external refs found!

KHC78967

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation