KHC78896

Description : branchpoint-bridging protein;Splicing factor 1 helix-hairpin domain;Zinc knuckle;KH domain

Gene families : OG_03_0003688 (OF) Phylogenetic Tree(s): OG0003688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KHC78896
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
CAG78384	No alias	Zinc finger, CCHC-type	0.02	OF
ESU07470	No alias	K Homology domain, type 1	0.02	OF
POW01550	No alias	Splicing factor 1, helix-hairpin domain;Zinc finger,...	0.03	OF
SPCC962.06c.1	No alias	zinc finger splicing factor Bpb1 [Source:PomBase;Acc:SPCC962.06c]	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032570	SF1-HH	17	143
IPR001878	Znf_CCHC	293	309
IPR004088	KH_dom_type_1	153	237

External Links

No external refs found!