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  5. KHC75427

KHC75427


Description : ATP-dependent RNA helicase DHX8/PRP22;Helicase associated domain (HA2);DEAD/DEAH box helicase;Oligonucleotide/oligosaccharide-binding (OB)-fold;S1 RNA binding domain;Helicase conserved C-terminal domain


Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KHC75427
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AFR95524 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
AFR97936 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OF
AOA65445 No alias Helicase-associated domain 0.04 OF
AOA66220 No alias Helicase, C-terminal 0.03 OF
CAG80826 No alias Domain of unknown function DUF1605 0.03 OF
CAG83003 No alias Helicase, C-terminal 0.04 OF
CAK44849 No alias Helicase associated domain (HA2) 0.02 OF
CAK46614 No alias Oligonucleotide/oligosaccharide-binding (OB)-fold 0.03 OF
CBF70766 No alias mRNA splicing factor RNA helicase 0.02 OF
CBF74845 No alias mRNA splicing factor RNA helicase 0.06 OF
CBF76926 No alias hypothetical protein similar to ATP dependent helicase 0.04 OF
EAA33344 No alias Helicase-associated domain 0.02 OF
EAL91525 No alias RNA helicase-like splicing factor (HRH1), putative 0.02 OF
EAU85955 No alias pre-mRNA splicing factor 0.02 OF
EAU92580 No alias ATP-dependent RNA helicase DHX8 0.06 OF
EDN95366 No alias Helicase, C-terminal 0.04 OF
EDN99006 No alias Helicase-associated domain 0.05 OF
EED80851 No alias S1 domain 0.03 OF
EED81955 No alias Domain of unknown function DUF1605 0.01 OF
EGR45053 No alias Helicase-associated domain 0.02 OF
EGR50716 No alias Helicase, C-terminal 0.03 OF
EJF55621 No alias Helicase conserved C-terminal domain 0.03 OF
ESU05632 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 0.03 OF
ESU10905 No alias ATP-dependent RNA helicase DHX8 0.03 OF
ESU17099 No alias Helicase, C-terminal 0.04 OF
MGG_02518T0 No alias ATP-dependent RNA helicase DHX8... 0.02 OF
MGG_03893T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
MGG_07501T0 No alias ATP-dependent RNA helicase DHX8... 0.03 OF
MGG_08807T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
POW03903 No alias Domain of unknown function DUF1605 0.01 OF
SPAC10F6.02c.1 No alias ATP-dependent RNA helicase Prp22... 0.03 OF
SPAC20H4.09.1 No alias ATP-dependent RNA helicase, spliceosomal (predicted)... 0.02 OF
SPBC1711.17.1 No alias ATP-dependent RNA helicase Prp16 [Source:PomBase;Acc:SPBC1711.17] 0.02 OF
YER013W No alias DEAH-box RNA-dependent ATPase/ATP-dependent RNA... 0.07 OF
YKR086W No alias DEAH-box RNA helicase involved in second catalytic step... 0.05 OF
YNR011C No alias RNA-dependent DExD/H-box ATPase; required for activation... 0.05 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 732 820
IPR011545 DEAD/DEAH_box_helicase_dom 343 497
IPR011709 DUF1605 879 955
IPR003029 S1_domain 73 145
IPR001650 Helicase_C 540 670
No external refs found!