YOL004W

Description : Component of both the Rpd3S and Rpd3L histone deacetylase complexes; involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity [Source:SGD;Acc:S000005364]

Gene families : OG_03_0000703 (OF) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YOL004W
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AFR93711	No alias	paired amphipathic helix protein Sin3a;C-terminal domain...	0.05	OF
AOA69269	No alias	Sin3, C-terminal	0.06	OF
CAG81516	No alias	Sin3, C-terminal	0.09	OF
CAL00485	No alias	C-terminal domain of Sin3a protein	0.1	OF
CBF85084	No alias	transcription factor	0.1	OF
EAL85320	No alias	transcription factor (Sin3), putative	0.07	OF
EAU81489	No alias	sin3b	0.04	OF
EDO03736	No alias	Histone deacetylase interacting domain	0.14	OF
EGR47271	No alias	Paired amphipathic helix	0.12	OF
ESA43920	No alias	Paired amphipathic helix	0.12	OF
ESA43921	No alias	Paired amphipathic helix	0.12	OF
ESU15861	No alias	Histone deacetylase interacting domain	0.12	OF
KHC82883	No alias	paired amphipathic helix protein Sin3a;C-terminal domain...	0.25	OF
MGG_13498T0	No alias	Putative uncharacterized protein...	0.03	OF
POW17244	No alias	Histone deacetylase interacting domain;Paired...	0.04	OF
SPAC23C11.15.1	No alias	Clr6 histone deacetylase complex subunit Pst2...	0.1	OF
SPBC12C2.10c.1	No alias	Clr6 histone deacetylase complex subunit Pst1...	0.15	OF
SPBC1734.16c.1	No alias	SIN3 family co-repressor Pst3 [Source:PomBase;Acc:SPBC1734.16c]	0.05	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR031693	Sin3_C	1138	1410
IPR003822	PAH	682	724
IPR003822	PAH	240	284
IPR003822	PAH	427	471
IPR013194	HDAC_interact_dom	750	845

External Links

No external refs found!

YOL004W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation