CAL00470


Description : Coatomer WD associated region


Gene families : OG_03_0002654 (OF) Phylogenetic Tree(s): OG0002654_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAL00470
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AFR96778 No alias coatomer protein complex, subunit alpha (xenin);Coatomer... 0.14 OF
AOA65926 No alias Coatomer, WD associated region 0.21 OF
CAG79756 No alias WD40 repeat 0.14 OF
CBF83542 No alias Coatomer alpha subunit 0.28 OF
EAA28645 No alias WD40 repeat 0.12 OF
EAL92694 No alias Coatomer subunit alpha, putative 0.18 OF
EAU89454 No alias coatomer subunit alpha-2 0.07 OF
EDN95254 No alias Coatomer, alpha subunit, C-terminal 0.11 OF
EGR48167 No alias WD40 repeat 0.15 OF
EJF57940 No alias Coatomer (COPI) alpha subunit C-terminus 0.05 OF
ESU14274 No alias coatomer subunit alpha 0.2 OF
KHC80117 No alias coatomer protein complex, subunit alpha (xenin);Coatomer... 0.14 OF
MGG_03511T0 No alias Coatomer alpha subunit [Source:UniProtKB/TrEMBL;Acc:G4N7Y7] 0.12 OF
POV98842 No alias Coatomer, alpha subunit, C-terminal;Coatomer, WD... 0.03 OF
SPBPJ4664.04.1 No alias coatomer alpha subunit Cop1 (predicted)... 0.05 OF
YDL145C No alias Alpha subunit of COPI vesicle coatomer complex; complex... 0.09 OF

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 344 772
IPR010714 Coatomer_asu_C 835 1200
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 204 236
IPR001680 WD40_repeat 127 163
IPR001680 WD40_repeat 246 281
IPR001680 WD40_repeat 45 79
No external refs found!