YNL049C

Description : Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SFB2 has a paralog, SEC24, that arose from the whole genome duplication [Source:SGD;Acc:S000004994]

Gene families : OG_03_0002520 (OF) Phylogenetic Tree(s): OG0002520_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YNL049C
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AFR93028	No alias	protein transporter SEC24;Sec23/Sec24 beta-sandwich...	0.06	OF
AOA68765	No alias	Zinc finger, Sec23/Sec24-type	0.04	OF
CAG77835	No alias	Gelsolin-like domain	0.05	OF
CAK45738	No alias	Sec23/Sec24 trunk domain	0.1	OF
CBF75535	No alias	Protein transport protein sec24	0.07	OF
EAA30475	No alias	Sec23/Sec24, trunk domain	0.04	OF
EAL89123	No alias	protein transport protein Sec24, putative	0.07	OF
EAU89307	No alias	protein transporter SEC24	0.07	OF
EGR49074	No alias	Sec23/Sec24 beta-sandwich	0.06	OF
EJF59567	No alias	Gelsolin repeat	0.03	OF
ESU12470	No alias	Sec23/Sec24 beta-sandwich	0.07	OF
KHC83622	No alias	protein transporter SEC24;Sec23/Sec24 helical...	0.07	OF
MGG_09564T0	No alias	Protein transport protein SEC24...	0.02	OF
POV98249	No alias	Sec23/Sec24, trunk domain;Sec23/Sec24...	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006895	Znf_Sec23_Sec24	161	196
IPR012990	Sec23_24_beta_S	510	591
IPR007123	Gelsolin-like_dom	731	805
IPR006900	Sec23/24_helical_dom	603	705
IPR006896	Sec23/24_trunk_dom	234	504

External Links

No external refs found!

YNL049C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation