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CAK47061


Description : DEAD/DEAH box helicase


Gene families : OG_03_0000272 (OF) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAK47061
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AFR95870 No alias pre-mRNA-splicing helicase BRR2;Sec63 Brl... 0.05 OF
AFR97124 No alias RNA helicase;Sec63 Brl domain;Helicase conserved... 0.02 OF
AOA66029 No alias DEAD/DEAH box helicase domain 0.05 OF
CAG78485 No alias DEAD/DEAH box helicase domain 0.06 OF
CBF84947 No alias pre-mRNA splicing helicase, putative 0.15 OF
EAA36222 No alias DEAD/DEAH box helicase domain 0.09 OF
EAL84455 No alias DEAD/DEAH box helicase, putative 0.05 OF
EAL85242 No alias pre-mRNA splicing helicase, putative 0.15 OF
EAU82983 No alias DNA polymerase theta/eta 0.05 OF
EAU82984 No alias pre-mRNA splicing factor 0.03 OF
EDO01959 No alias Sec63 domain 0.06 OF
EGR47626 No alias DEAD/DEAH box helicase domain 0.08 OF
EJF58137 No alias N-terminal helicase PWI domain 0.04 OF
ESU06499 No alias Brr2, N-terminal helicase PWI domain 0.17 OF
KHC75382 No alias hypothetical protein;Helicase conserved C-terminal... 0.02 OF
KHC76781 No alias pre-mRNA-splicing helicase BRR2;Sec63 Brl... 0.1 OF
MGG_15536T0 No alias Putative uncharacterized protein... 0.12 OF
POV98191 No alias Sec63 domain;DEAD/DEAH box helicase domain 0.03 OF
POW12741 No alias Brr2, N-terminal helicase PWI domain;Helicase,... 0.02 OF
SPAC9.03c.1 No alias U5 snRNP complex subunit Brr2 [Source:PomBase;Acc:SPAC9.03c] 0.04 OF
SPBC13G1.10c.1 No alias ATP-dependent RNA helicase Slh1, human ASCC3 ortholog... 0.04 OF
YER172C No alias RNA-dependent ATPase RNA helicase (DEIH box); required... 0.07 OF
YGR271W No alias Putative RNA helicase related to Ski2p; involved in... 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 538 713
IPR011545 DEAD/DEAH_box_helicase_dom 1389 1538
IPR041094 Brr2_helicase_PWI 300 413
IPR004179 Sec63-dom 1038 1344
IPR004179 Sec63-dom 1873 1961
IPR001650 Helicase_C 773 916
No external refs found!