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  5. YMR116C

YMR116C


Description : G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation [Source:SGD;Acc:S000004722]


Gene families : OG_03_0001249 (OF) Phylogenetic Tree(s): OG0001249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YMR116C
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AFR98895 No alias guanine nucleotide-binding protein subunit beta-like... 0.34 OF
AOA65820 No alias WD domain, G-beta repeat 0.31 OF
AOA66673 No alias WD domain, G-beta repeat 0.33 OF
CAG79765 No alias WD40 repeat 0.24 OF
CAK37130 No alias WD domain, G-beta repeat 0.22 OF
CBF74576 No alias GBLP_NEUCR Guanine nucleotide-binding protein beta... 0.27 OF
EAA30834 No alias WD40 repeat 0.22 OF
EAL89476 No alias G-protein comlpex beta subunit CpcB 0.34 OF
EAU91321 No alias guanine nucleotide binding protein beta subunit 0.29 OF
EDN91497 No alias WD40 repeat 0.23 OF
EGR51292 No alias WD40 repeat 0.23 OF
ESU16510 No alias WD40 repeat 0.32 OF
KHC71810 No alias guanine nucleotide-binding protein subunit beta-2-like 1... 0.23 OF
MGG_04719T0 No alias Guanine nucleotide-binding protein subunit beta-like... 0.21 OF
POW13352 No alias WD40 repeat 0.27 OF
SPAC6B12.15.1 No alias RACK1 ortholog Cpc2 [Source:PomBase;Acc:SPAC6B12.15] 0.25 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 138 182
IPR001680 WD40_repeat 11 45
IPR001680 WD40_repeat 56 93
IPR001680 WD40_repeat 191 224
IPR001680 WD40_repeat 290 313
IPR001680 WD40_repeat 101 134
No external refs found!