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  5. CAK43742

CAK43742


Description : RNA polymerase Rpb2, domain 3


Gene families : OG_03_0002674 (OF) Phylogenetic Tree(s): OG0002674_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: CAK43742
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AFR97232 No alias DNA-directed RNA polymerase III subunit RPC2;RNA... 0.02 OF
AOA70175 No alias RNA polymerase Rpb2, domain 2 0.02 OF
CAG83219 No alias RNA polymerase Rpb2, domain 3 0.05 OF
CBF89725 No alias DNA-directed RNA polymerase III, beta subunit, putative 0.06 OF
EAA27959 No alias RNA polymerase Rpb2, domain 4 0.09 OF
EAL87958 No alias DNA-directed RNA polymerase III, beta subunit, putative 0.07 OF
EDO01279 No alias RNA polymerase Rpb2, domain 3 0.05 OF
EJF60120 No alias RNA polymerase beta subunit 0.02 OF
ESU06078 No alias DNA-directed RNA polymerase III 0.04 OF
KHC70428 No alias DNA-directed RNA polymerase III subunit RPC2;"RNA... 0.07 OF
MGG_06984T0 No alias DNA-directed RNA polymerase III subunit RPC2... 0.03 OF
POW07023 No alias RNA polymerase Rpb2, domain 5;RNA polymerase, beta... 0.02 OF
SPAC4G9.08c.1 No alias DNA-directed RNA polymerase III complex subunit Rpc2... 0.04 OF
YOR207C No alias Second-largest subunit of RNA polymerase III; RNA... 0.04 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007645 RNA_pol_Rpb2_3 527 590
IPR007120 DNA-dir_RNAP_su2_dom 756 1128
IPR007642 RNA_pol_Rpb2_2 268 448
IPR007647 RNA_pol_Rpb2_5 709 749
IPR007644 RNA_pol_bsu_protrusion 114 501
IPR007646 RNA_pol_Rpb2_4 629 688
IPR007641 RNA_pol_Rpb2_7 1130 1214
No external refs found!