CAK42852


Description : PMC2NT (NUC016) domain


Gene families : OG_03_0003746 (OF) Phylogenetic Tree(s): OG0003746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAK42852
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AFR93919 No alias exosome complex exonuclease RRP6;3'-5'... 0.13 OF
AOA66858 No alias HRDC domain 0.08 OF
CAG79122 No alias HRDC domain 0.25 OF
EAA30664 No alias Exosome-associated factor Rrp6, N-terminal 0.11 OF
EAL92593 No alias exosome complex exonuclease Rrp6, putative 0.44 OF
EED79945 No alias 3'-5' exonuclease domain 0.03 OF
EGR49168 No alias HRDC domain 0.32 OF
EJF62098 No alias PMC2NT (NUC016) domain 0.07 OF
ESU12093 No alias 3'-5' exonuclease domain 0.33 OF
KHC83281 No alias exosome complex exonuclease RRP6;3'-5'... 0.35 OF
MGG_00896T0 No alias Exosome complex exonuclease Rrp... 0.25 OF
SPAC1F3.01.1 No alias exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)... 0.13 OF
YOR001W No alias Nuclear exosome exonuclease component; has 3'-5'... 0.25 OF

Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012588 Exosome-assoc_fac_Rrp6_N 19 109
IPR002121 HRDC_dom 453 520
IPR002562 3'-5'_exonuclease_dom 230 396
No external refs found!