CAK42521


Description : LSM domain


Gene families : OG_03_0000514 (OF) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAK42521
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AFR94945 No alias small nuclear ribonucleoprotein F;LSM domain 0.04 OF
CAG83711 No alias LSM domain, eukaryotic/archaea-type 0.05 OF
CBF79732 No alias small nuclear ribonucleoprotein SmF, putative 0.09 OF
CBF81168 No alias U6 snRNA-associated Sm-like protein LSm6, putative 0.09 OF
EAA27289 No alias LSM domain, eukaryotic/archaea-type 0.07 OF
EAL93847 No alias small nuclear ribonucleoprotein SmF, putative 0.13 OF
EAU84577 No alias small nuclear riboprotein F 0.03 OF
EDO64904 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
EGR50712 No alias LSM domain, eukaryotic/archaea-type 0.06 OF
EGR52926 No alias LSM domain, eukaryotic/archaea-type 0.07 OF
EJF58527 No alias LSM domain 0.04 OF
ESU05642 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
ESU06692 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
KHC71007 No alias U6 snRNA-associated Sm-like protein LSm6;LSM domain 0.02 OF
KHC75209 No alias small nuclear ribonucleoprotein F;LSM domain 0.03 OF
MGG_03895T0 No alias Small nuclear ribonucleoprotein F... 0.06 OF
SPBC3E7.14.1 No alias Sm snRNP core protein Smf1 [Source:PomBase;Acc:SPBC3E7.14] 0.04 OF
YDR378C No alias Lsm (Like Sm) protein; part of heteroheptameric... 0.03 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 11 74
No external refs found!