Description : Spt4p/5p (DSIF) transcription elongation factor complex subunit; the Spt4/5 complex binds to ssRNA in a sequence-specific manner, and in concert with RNAP I and II has multiple roles regulating transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; interacts with DNA upstream of RNAPII and the non-template strand of the transcription bubble; Spt5p is the only transcription elongation factor conserved in all domains of life [Source:SGD;Acc:S000004470]

Gene families : OG_03_0002477 (OF) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: YML010W
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
CAG82038 No alias Spt5 C-terminal nonapeptide repeat binding Spt4 0.03 OF
CAK38596 No alias Spt5 transcription elongation factor, acidic N-terminal 0.02 OF
EJF59908 No alias KOW motif 0.02 OF
KHC81221 No alias transcription elongation factor SPT5;"Spt5 transcription... 0.06 OF
SPAC23C4.19.1 No alias DSIF transcription elongation factor complex subunit... 0.03 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005100 NGN-domain 287 372
IPR022581 Spt5_N 180 280
No external refs found!