CAK40810

Description : Transcription factor S-II (TFIIS)

Gene families : OG_03_0002783 (OF) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAK40810
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AFR98006	No alias	DNA-directed RNA polymerase I subunit...	0.11	OF
AOA68167	No alias	Zinc finger, TFIIS-type	0.04	OF
CAG83791	No alias	Zinc finger, TFIIS-type	0.04	OF
CBF79505	No alias	DNA-directed RNA polymerase I 13.1 kDa polypeptide, putative	0.06	OF
EAA32552	No alias	DNA-directed RNA polymerase, M/15kDa subunit	0.09	OF
EED48740	No alias	DNA-directed RNA polymerase I 13.1 kDa polypeptide, putative	0.04	OF
EGR51719	No alias	Zinc finger, TFIIS-type	0.11	OF
KHC81761	No alias	DNA-directed RNA polymerase I subunit...	0.05	OF
POW08349	No alias	Zinc finger, TFIIS-type	0.06	OF
SPCC1259.03.1	No alias	DNA-directed RNA polymerase complex I subunit Rpa12...	0.04	OF
YJR063W	No alias	RNA polymerase I subunit A12.2; contains two zinc...	0.08	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001222	Znf_TFIIS	81	116

External Links

No external refs found!

CAK40810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation