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  5. YBR154C

YBR154C


Description : RNA polymerase subunit ABC27; common to RNA polymerases I, II, and III; contacts DNA and affects transactivation [Source:SGD;Acc:S000000358]


Gene families : OG_03_0002847 (OF) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YBR154C
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AFR92924 No alias DNA-directed RNA polymerase I, II, and III subunit... 0.03 OF
AOA68443 No alias RNA polymerase, Rpb5, N-terminal 0.03 OF
CAG80674 No alias RNA polymerase, Rpb5, N-terminal 0.03 OF
CBF88854 No alias RNA polymerase subunit 0.05 OF
EAA32840 No alias RNA polymerase, Rpb5, N-terminal 0.02 OF
EAL90743 No alias RNA polymerase subunit 0.11 OF
EDO00149 No alias RNA polymerase, subunit H/Rpb5 C-terminal 0.04 OF
EED54463 No alias RNA polymerase subunit 0.02 OF
EGR51709 No alias RNA polymerase, Rpb5, N-terminal 0.04 OF
ESU16372 No alias DNA-directed RNA polymerases II 24 kDa polypeptide 0.07 OF
KHC84018 No alias DNA-directed RNA polymerase I, II, and III subunit... 0.07 OF
MGG_06083T0 No alias DNA-directed RNA polymerase I... 0.05 OF
POW12921 No alias RNA polymerase, Rpb5, N-terminal;RNA polymerase, subunit... 0.02 OF
SPAC23C4.15.1 No alias DNA-directed RNA polymerase I, II and III subunit Rpb5... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000783 RNA_pol_subH/Rpb5_C 142 214
IPR005571 RNA_pol_Rpb5_N 6 99
No external refs found!