CAK39950


Description : Gar1/Naf1 RNA binding region


Gene families : OG_03_0001414 (OF) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAK39950
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AFR95380 No alias H/ACA ribonucleoprotein complex non-core subunit... 0.04 OF
AOA67725 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.06 OF
CBF88898 No alias snoRNP assembly factor Naf1, putative 0.09 OF
EAA26677 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.05 OF
EAL90720 No alias snoRNP assembly factor Naf1, putative 0.11 OF
EAU92561 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.02 OF
EDN96445 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.08 OF
EGR51431 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.14 OF
ESU11179 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.06 OF
KHC71357 No alias H/ACA ribonucleoprotein complex non-core subunit... 0.12 OF
MGG_10116T0 No alias Putative uncharacterized protein... 0.12 OF
SPBC30D10.15.1 No alias snoRNP assembly factor Naf1 (predicted)... 0.08 OF
YNL124W No alias RNA-binding protein required for the assembly of box... 0.02 OF

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007504 H/ACA_rnp_Gar1/Naf1 258 403
No external refs found!