1. Home
  2. Species
  3. Saccharomyces cerevisiae
  4. Sequence
  5. YLR196W

YLR196W


Description : Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily [Source:SGD;Acc:S000004186]


Gene families : OG_03_0003795 (OF) Phylogenetic Tree(s): OG0003795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLR196W
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR97524 No alias periodic tryptophan protein 1;WD domain, G-beta repeat 0.29 OF
AOA69012 No alias Nucleoporin Nup120/160 0.27 OF
CAG78980 No alias WD40 repeat 0.3 OF
CBF89749 No alias rRNA processing protein Pwp1, putative 0.29 OF
EAA35878 No alias Nucleoporin Nup120/160 0.32 OF
EAL87975 No alias rRNA processing protein Pwp1, putative 0.3 OF
EDO00043 No alias WD40 repeat 0.21 OF
EFI27913 No alias transducin family protein/WD-40 repeat family protein 0.14 OF
EGR50947 No alias WD40 repeat 0.17 OF
ESU05633 No alias Interpro Signature:Nucleoporin Nup120/160 0.26 OF
KHC78092 No alias periodic tryptophan protein 1;"WD domain, G-beta repeat" 0.37 OF
MGG_04802T0 No alias Periodic tryptophan protein 1... 0.25 OF
SPBC1711.16.1 No alias WD repeat protein Pwp1 (predicted)... 0.27 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 279 315
No external refs found!