YKR056W


Description : tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair [Source:SGD;Acc:S000001764]


Gene families : OG_03_0001357 (OF) Phylogenetic Tree(s): OG0001357_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YKR056W
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR97309 No alias tRNA (uracil-5-)-methyltransferase;tRNA... 0.2 OF
AOA68396 No alias TRAM domain 0.05 OF
CAG78461 No alias TRAM domain 0.09 OF
CAK48706 No alias tRNA (Uracil-5-)-methyltransferase 0.17 OF
CBF90119 No alias tRNA methyltransferase 0.19 OF
EAA34385 No alias (Uracil-5)-methyltransferase family 0.06 OF
EAL91457 No alias tRNA(m5U54)methyltransferase 0.09 OF
EAU93579 No alias tRNA methyltransferase 0.04 OF
EDN98555 No alias (Uracil-5)-methyltransferase family 0.15 OF
EED78459 No alias (Uracil-5)-methyltransferase family 0.02 OF
EGR45831 No alias (Uracil-5)-methyltransferase family 0.08 OF
ESU17907 No alias (Uracil-5)-methyltransferase family 0.12 OF
KHC82925 No alias tRNA (uracil-5-)-methyltransferase;tRNA... 0.34 OF
MGG_03881T0 No alias tRNA (Uracil-5-)-methyltransferase... 0.22 OF
SPAC4G8.07c.1 No alias tRNA (m5U54) methyltransferase Trm2 (predicted)... 0.04 OF

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 426 638
IPR002792 TRAM_dom 164 227
No external refs found!