CBF87771


Description : tRNA ligase


Gene families : OG_03_0001203 (OF) Phylogenetic Tree(s): OG0001203_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBF87771
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AOA68773 No alias tRNA ligase, kinase domain, fungi 0.02 OF
CAK39828 No alias Fungal tRNA ligase phosphodiesterase domain 0.05 OF
EAA28251 No alias tRNA ligase, kinase domain, fungi 0.04 OF
EAL90298 No alias tRNA ligase 0.04 OF
EED84337 No alias RNA ligase T4 Rnl1, N-terminal 0.01 OF
EGR45278 No alias tRNA ligase, phosphodiesterase 0.09 OF
EJF58156 No alias Fungal tRNA ligase phosphodiesterase domain 0.06 OF
ESU08269 No alias tRNA ligase, kinase domain, fungi 0.1 OF
KHC71890 No alias tRNA ligase;tRNA ligase kinase domain;Fungal tRNA ligase... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003972 RNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015965 tRNA_lig_PDEase 537 806
IPR015966 tRNA_lig_kin_fungi 373 534
IPR019039 RNA_ligase_T4-Rnl1_N 56 288
No external refs found!