CBF86944

Description : DEAD/DEAH box helicase, putative

Gene families : OG_03_0000272 (OF) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CBF86944
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AFR95870	No alias	pre-mRNA-splicing helicase BRR2;Sec63 Brl...	0.11	OF
AFR97124	No alias	RNA helicase;Sec63 Brl domain;Helicase conserved...	0.06	OF
AOA65958	No alias	DEAD/DEAH box helicase domain	0.02	OF
AOA66029	No alias	DEAD/DEAH box helicase domain	0.14	OF
CAG78485	No alias	DEAD/DEAH box helicase domain	0.06	OF
CAK46557	No alias	DEAD/DEAH box helicase	0.03	OF
EAA36222	No alias	DEAD/DEAH box helicase domain	0.08	OF
EAL84455	No alias	DEAD/DEAH box helicase, putative	0.06	OF
EAL85242	No alias	pre-mRNA splicing helicase, putative	0.14	OF
EAU82983	No alias	DNA polymerase theta/eta	0.06	OF
EAU82984	No alias	pre-mRNA splicing factor	0.03	OF
EDN98214	No alias	Helicase, C-terminal	0.05	OF
EDO01959	No alias	Sec63 domain	0.07	OF
EGR47626	No alias	DEAD/DEAH box helicase domain	0.15	OF
EJF58137	No alias	N-terminal helicase PWI domain	0.04	OF
ESU06499	No alias	Brr2, N-terminal helicase PWI domain	0.05	OF
KHC75382	No alias	hypothetical protein;Helicase conserved C-terminal...	0.13	OF
KHC76781	No alias	pre-mRNA-splicing helicase BRR2;Sec63 Brl...	0.07	OF
MGG_15536T0	No alias	Putative uncharacterized protein...	0.1	OF
POV98191	No alias	Sec63 domain;DEAD/DEAH box helicase domain	0.02	OF
SPAC9.03c.1	No alias	U5 snRNP complex subunit Brr2 [Source:PomBase;Acc:SPAC9.03c]	0.12	OF
SPBC13G1.10c.1	No alias	ATP-dependent RNA helicase Slh1, human ASCC3 ortholog...	0.11	OF
YER172C	No alias	RNA-dependent ATPase RNA helicase (DEIH box); required...	0.1	OF
YGR271W	No alias	Putative RNA helicase related to Ski2p; involved in...	0.1	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004179	Sec63-dom	785	1090
IPR004179	Sec63-dom	1626	1975
IPR011545	DEAD/DEAH_box_helicase_dom	291	474
IPR011545	DEAD/DEAH_box_helicase_dom	1135	1298
IPR001650	Helicase_C	1411	1498

External Links

No external refs found!