CBF79351

Description : subunit of heterotrimeric Replication Factor

Gene families : OG_03_0002782 (OF) Phylogenetic Tree(s): OG0002782_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CBF79351
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
AFR95001	No alias	replication factor A1;Replication protein A OB...	0.05	OF
AOA66855	No alias	Replication factor-A protein 1, N-terminal	0.05	OF
CAG79583	No alias	Replication factor A, C-terminal	0.03	OF
CAK37984	No alias	Replication protein A OB domain	0.05	OF
EAA32097	No alias	Replication factor-A protein 1, N-terminal	0.16	OF
EAL87723	No alias	replication protein A 70 kDa DNA-binding subunit	0.14	OF
EAU88740	No alias	replication factor-A protein 1	0.03	OF
EDN92310	No alias	Replication factor A, C-terminal	0.04	OF
EGR53134	No alias	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	0.13	OF
ESU16798	No alias	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	0.08	OF
KHC81114	No alias	replication factor-a protein 1 (rpa1);Replication...	0.09	OF
MGG_00685T0	No alias	Replication factor-A protein 1...	0.04	OF
SPBC660.13c.1	No alias	DNA replication factor A subunit Ssb1...	0.04	OF
YAR007C	No alias	Subunit of heterotrimeric Replication Protein A (RPA);...	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR031657	REPA_OB_2	292	389
IPR007199	Rep_factor-A_N	8	107
IPR004365	NA-bd_OB_tRNA	183	270
IPR013955	Rep_factor-A_C	448	593

External Links

No external refs found!