Description : Subunit of the SWI/SNF chromatin remodeling complex; SWI/SNF regulates transcription by remodeling chromosomes; contains SANT domain that is required for SWI/SNF assembly; is essential for displacement of histone H2A-H2B dimers during ATP-dependent remodeling; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; relocates to the cytosol under hypoxic conditions [Source:SGD;Acc:S000003712]

Gene families : OG_03_0001138 (OF) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: YJL176C
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AFR95685 No alias hypothetical protein;Myb-like DNA-binding domain;Zinc... 0.02 OF
CAG78285 No alias SMARCC, C-terminal 0.08 OF
CAK39321 No alias Myb-like DNA-binding domain 0.07 OF
CBF71287 No alias component of the RSC chromatin remodeling complex 0.09 OF
EAA33437 No alias SMARCC, C-terminal 0.08 OF
EAL86920 No alias RSC complex subunit (RSC8), putative 0.06 OF
EAU89507 No alias Smarcc1 protein 0.05 OF
EGR51851 No alias SWIRM domain 0.05 OF
ESU07291 No alias SWIRM domain 0.08 OF
MGG_01720T0 No alias Transcription regulatory protein SWI3... 0.05 OF
POW08258 No alias SWIRM domain;SANT/Myb domain;SMARCC, C-terminal 0.01 OF
SPAC17G6.10.1 No alias SWI/SNF and RSC complex subunit Ssr1... 0.03 OF
SPAC23H3.10.1 No alias SWI/SNF and RSC complex subunit Ssr2... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 526 568
IPR032451 SMARCC_C 658 736
IPR007526 SWIRM 308 393
No external refs found!