Description : Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410]
Gene families : OG_03_0000304 (OF) Phylogenetic Tree(s): OG0000304_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: YIL148W | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AFR92505 | No alias | polyubiquitin;Ribosomal L40e family;Ubiquitin family | 0.6 | OF | |
AFR94963 | No alias | small subunit ribosomal protein S27Ae;Ribosomal protein... | 0.51 | OF | |
AOA67253 | No alias | Ubiquitin-like domain | 0.41 | OF | |
AOA68626 | No alias | Ubiquitin-like domain | 0.4 | OF | |
CAG77982 | No alias | Ubiquitin-like domain | 0.25 | OF | |
CAG78029 | No alias | Ribosomal protein S27a | 0.03 | OF | |
CAK43654 | No alias | Ubiquitin family | 0.43 | OF | |
CAK44245 | No alias | Ubiquitin family | 0.49 | OF | |
CBF76581 | No alias | Putative uncharacterized proteinUBI1 | 0.52 | OF | |
EAL92455 | No alias | ubiquitin (UbiC), putative | 0.6 | OF | |
EAU90492 | No alias | ubiquitin | 0.28 | OF | |
EAU92224 | No alias | ubiquitin-carboxy extension protein fusion | 0.22 | OF | |
EBA27335 | No alias | ubiquitin UbiA, putative | 0.47 | OF | |
EDN95160 | No alias | Ribosomal protein S27a | 0.42 | OF | |
EDN96945 | No alias | Ubiquitin-like domain | 0.37 | OF | |
EED83182 | No alias | Ubiquitin-like domain | 0.04 | OF | |
EED85602 | No alias | Ubiquitin-like domain | 0.46 | OF | |
EGR45214 | No alias | Ubiquitin-like domain | 0.24 | OF | |
EGR47867 | No alias | Ubiquitin-like domain | 0.13 | OF | |
EJF59025 | No alias | Ubiquitin family | 0.18 | OF | |
ESA41890 | No alias | Ubiquitin-like domain | 0.46 | OF | |
ESA41891 | No alias | Ubiquitin-like domain | 0.46 | OF | |
ESA42315 | No alias | Ribosomal protein L40e | 0.06 | OF | |
ESA42316 | No alias | Ribosomal protein L40e | 0.06 | OF | |
ESU07327 | No alias | Ubiquitin-like domain | 0.57 | OF | |
ESU17811 | No alias | Ribosomal protein S27a | 0.53 | OF | |
KHC76789 | No alias | polyubiquitin;Ribosomal protein S27a;Ubiquitin family | 0.55 | OF | |
MGG_06044T0 | No alias | Ubiquitin-60S ribosomal protein L40... | 0.2 | OF | |
MGG_07928T0 | No alias | Ubiquitin-40S ribosomal protein S27a... | 0.04 | OF | |
POW04691 | No alias | Ubiquitin-like domain;Ribosomal protein S27a | 0.52 | OF | |
SPAC11G7.04.1 | No alias | ribosomal-ubiquitin fusion protein Ubi1 (predicted)... | 0.29 | OF | |
SPAC1805.12c.1 | No alias | ribosomal-ubiquitin fusion protein Ubi2... | 0.35 | OF | |
SPAC589.10c.1 | No alias | ribosomal-ubiquitin fusion protein Ubi5 (predicted)... | 0.33 | OF | |
SPAC6G10.11c.1 | No alias | ribosomal-ubiquitin fusion protein Ubi3 (predicted)... | 0.21 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |