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CBF71237


Description : splicing factor u2af large subunit


Gene families : OG_03_0003294 (OF) Phylogenetic Tree(s): OG0003294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBF71237
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AFR96167 No alias splicing factor U2AF 65 kDa subunit;RNA recognition... 0.03 OF
AOA65950 No alias RNA recognition motif domain 0.02 OF
CAL00224 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.07 OF
EAA34808 No alias RNA recognition motif domain 0.07 OF
EAL86940 No alias splicing factor u2af large subunit 0.04 OF
EAU90350 No alias rRNA primary transcript binding protein 0.06 OF
EDO00117 No alias RNA recognition motif domain 0.06 OF
EGR50767 No alias RNA recognition motif domain 0.08 OF
ESU13236 No alias RNA recognition motif domain 0.09 OF
MGG_00348T0 No alias Splicing factor U2AF 50 kDa subunit... 0.08 OF
YKL074C No alias Protein involved in early pre-mRNA splicing; component... 0.01 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 472 532
IPR000504 RRM_dom 226 297
IPR000504 RRM_dom 342 412
No external refs found!