Description : DNA ligase

Gene families : OG_03_0003578 (OF) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CBF70249
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
CAK97160 No alias ATP dependent DNA ligase C terminal region 0.08 OF
EAA27885 No alias DNA ligase, ATP-dependent, C-terminal 0.06 OF
EAL93197 No alias DNA ligase Cdc9, putative 0.04 OF
ESU11415 No alias DNA ligase 0.04 OF
MGG_06370T0 No alias DNA ligase 1 [Source:UniProtKB/TrEMBL;Acc:G4N7T1] 0.04 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012309 DNA_ligase_ATP-dep_C 777 895
IPR012308 DNA_ligase_ATP-dep_N 268 463
IPR012310 DNA_ligase_ATP-dep_cent 530 752
No external refs found!